Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1550 |
Symbol | |
ID | 4664476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 1840263 |
End bp | 1841951 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639819783 |
Product | TPR repeat-containing protein |
Protein accession | YP_966994 |
Protein GI | 120602594 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.119519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCCT TCCGCCGTTC CGTTGCCGCC GTCGTCACCG CCCTGCCCCT CATCGCAGGT GGATGCGCCC ATCGCCCCGC TGTCGAAACG GCCTCGCCAG AGGCCGTACA GTGGAACCTC TCCGATGGTG CCGAAACGAC CTTCTACTAC CTCATGCTTG ATCAGGCGGC CCGCAGCGAC AACACCCGCG ACGCCATCGA AGCCATCGAG AACCTCATCC GGCTGTCTCC CACGGCCCGT GTCTACAACG ACTCCGGCAG CTTCCTGCTG TCACGCAAGG AGCCCGACCT CGCCCGTGAC ATCCTCACGC GCGGCGTCGC AGCCCACCCG GACGACCTCG GCCTGACCCT GCTTCTCGCC GAAAGCTACC TCGACCTCGA CCGCAACGAC GAGGCCATCG CCCTGCTGCG CGCCTATAAC GCCAAGCACC CCAAGGACGA CGAGGCACGG CAGGAACTGG CACAACTTCT TGTGAAGACC CGCCGTTACG AAGAGGCCGA CAAGCTCATC CTGTCCATCG GGGAGACCTC GCGCACGTCG CTCCTGCGGT ACTACCACGC GCGCGCCCTC ATGGGGCTCA ACCGCCTCAC AGAGGCCACG GCGCAACTCC GCAAGGCGGT CAAGGCATCT CCCGACTTCC TCGAGGCATG GGCCGAACTG GCCTATGTGT ATGAGCTTCG CAAGAACTAC GTCGAAGCGG AAAAGATCTA CGAACAGATT CTGGCTCTCG ACGAGGGCAA TCAGGACGTC TGGCTACGAC TGGTGGCCAT CAACATCAAG CTCAACAACC CCGTCAAGGC CTATGAGCTG GCACGGCAAG GGCCGGAGAC CTTCGGCTTC ATGCTCACGG CCGCAACGCT ATTCCTCGAT GACAGGTTCT TCGAACAGGC CGAAGGTCTG CTTCTGGCCG TGAAGGATTC GCCCGGGGCT CCGGAAGAAG TCTACTTCTT CCTCGCCGTG CTGGCCTACG AGGGACAGCG CGATACGGAC GCCACCCTGT CGTGGCTGCT AGAAGTGCGC CCCACCAATA AGTACTACGA CCGCGCCCTG CGCCTGCGTA GCCAGCTGCT CTATGAGAAG GGCGACCTCG AAGCGGCGCT GCGGACAGCC CGCGAAGGCC GTGAGACATT CCCCGAGCAA AGGGACTTCC GCGAGATGGA GGCGCAACTT CTCGTCAACA TGGGGCGCTC CGAAGAGGCA CTCCGGGTCA TCGATAAGGC CGCCGACCGC TGGCCCGATG ACAGCGGCCT GCTGTTCATG CGCGCCCTCA TCCTCGACGA CAGGGGTGCG AAGGACGCTG CCTTCGCCGC CATGGAAGAG GTCATCAAGG CCTCTCCCGA CCATGCACAG GCCCTGAACT ATGTGGGTTA CACCCTTGCG GAACAGGAGC GCGACCTTAC CCGGGCCGTC TCCCTTCTCG AACGCGCCAA TACCCTTTCG CCCGACAACC CCTTCATCCT CGACTCGCTG GCATGGGCCT ACTTCAAGGC GGGCCGCATG CCCGAAGCAT GGAAGGCCAT CAGCCGCGCC ATCGAACTCA ATGCGCCCGA CCCCATCATC TGGGAGCATT ACGGAGACAT CGCCACGGCC ATGGGGCAGA AGAACACGGC GCGGCGCGCC TACCGCAAGG CCCTGTCCAT GAACCCGCAG AATCCCGACG CCATCAAGGC CAAACTCGAC AAAAAATGA
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Protein sequence | MPSFRRSVAA VVTALPLIAG GCAHRPAVET ASPEAVQWNL SDGAETTFYY LMLDQAARSD NTRDAIEAIE NLIRLSPTAR VYNDSGSFLL SRKEPDLARD ILTRGVAAHP DDLGLTLLLA ESYLDLDRND EAIALLRAYN AKHPKDDEAR QELAQLLVKT RRYEEADKLI LSIGETSRTS LLRYYHARAL MGLNRLTEAT AQLRKAVKAS PDFLEAWAEL AYVYELRKNY VEAEKIYEQI LALDEGNQDV WLRLVAINIK LNNPVKAYEL ARQGPETFGF MLTAATLFLD DRFFEQAEGL LLAVKDSPGA PEEVYFFLAV LAYEGQRDTD ATLSWLLEVR PTNKYYDRAL RLRSQLLYEK GDLEAALRTA REGRETFPEQ RDFREMEAQL LVNMGRSEEA LRVIDKAADR WPDDSGLLFM RALILDDRGA KDAAFAAMEE VIKASPDHAQ ALNYVGYTLA EQERDLTRAV SLLERANTLS PDNPFILDSL AWAYFKAGRM PEAWKAISRA IELNAPDPII WEHYGDIATA MGQKNTARRA YRKALSMNPQ NPDAIKAKLD KK
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