| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1532 |
|---|
| Symbol | |
|---|
| ID | 4664677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 1820945 |
|---|
| End bp | 1823275 |
|---|
| Gene Length | 2331 bp |
|---|
| Protein Length | 776 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639819765 |
|---|
| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
|---|
| Protein accession | YP_966976 |
|---|
| Protein GI | 120602576 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.846759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGGTA AGCGGCTTCA GGCAGCGCTC AATGCGGCTG TCGGAGAGGT GCGGGTGCGT
AATCACGAGT ACCTCACCTT GGAGCATCTG CTGTATGCCA TTGCCGGTGA AGAACAGGGC
AAGGGCATCC TTGAGGGGTG CGGTGCGGAT GTGACGGCGT TGCGTGCACG CCTTGAGGAG
TTCTTCGGGA CGCATCTCGA AAGCCTGCCC GAGGACATGA CCACCGAAGT GGTGCAGACC
CTCGGAGTGC AGCGGGTGTT GCAGCGTGCC TTCAGGCACA TCCAGTCGGC AGGGCGGCCT
CTGGTGGAGA TTGGCGACGT ACTCGCCGCC CTTTTTGACG AGGACGACAC CTACGCCGTC
TATTTTCTCA AGACGCAAGG TGTTTCGCGT CTGGATGTGC TTGAATACAT CTCCCACGCC
ATGCCCGAGG CGGACGATGA CGCCATGGAC GGTGACGATG AAGGCGACGG GGGGGCCTCG
ACGCGCGCTG ACGCGCTTGC CCAGTATGCC ACCGACCTCA CCGCGCGGGC GCGTGAAGGA
CGCATCGACC CGCTCATAGG GCGGGAGGAC GAACTCGAAC GCACGGTGCA GGTGCTTTCG
CGTCGGCGCA AGAACAACCC CCTCTTCGTG GGCGACCCCG GTGTGGGCAA GACCGCCATC
GCCGAAGGGC TGGCCCTGCG CATTGCCGTG GGGGCCGTCC CCGAGAGTTT CCGCAAGGCG
CGTGTCTATG CACTCGACAT GGGGTCGCTG CTTGCTGGCA CCAAGTACCG GGGAGACTTC
GAGGCACGCC TCAAGGCCGT CATCAGCGAA CTTTCACGCC AGCCCGACGC CATCCTGTTC
ATCGACGAGA TACACACCAT CGTCGGGGCG GGGGCGACCA GCGGCGGGTC GATGGATGCC
TCGAACATCC TCAAGCCGGT ACTTGCCTCG GGTGCCATAC GGTGCATCGG GTCCACCACG
CATGAGGAGT ACCGCAACCA TTTCGAGAAA GACCGCGCGC TCTCCCGTCG CTTCCAGAAG
ATAGACATCG GCGAGCCCAC GCAGGAGGAA TGCGTGGAGA TACTCAAAGG GCTCAAGGAA
CACTACGAAG AGCACCACGC CGTCCGCTAT ACACTGCCCG CACTGCGTGC CGCGGTCGAA
CTCTCGGCCC GTTACGTCAA CGACAGGCTT CTGCCGGACA AGGCCATCGA CGTCGTCGAC
GAAGCCGGGG CCGCCATGCG GCTGCGTGCC GGGTTCAAGC CGGGGGCGAG TGTCTCGGTG
CAGGACGTGG AACGTGTCGT GGCGCGTATG GCCCATGTGC CGCCACGCTC CATCTCCTCT
TCAGACCGTG ACAGGTTGAA GACGCTCGAG AACGACCTTG GCAAGGCAGT CTTCGGACAG
GAGGCCGCCG TAGCGGTGGT CGCCCGTTCC ATCCTGCGGG CCCGTGCGGG GTTCGGGCGG
GAGGACAGGC CTACGGGCAG CTTCCTCTTC TACGGGCCCA CAGGCGTGGG CAAGACCGAA
CTGGCCCGTA GCCTCGCCAA ACGGCTAGGG GTGGCCTTTC TGCGCTACGA CATGAGTGAA
TACATGGAAA AGCATGCGGT CTCGCGGTTC ATCGGCGCGC CTCCCGGCTA TGTCGGATAT
GACCAGGGCG GCCAGCTTAC CGAGGCGGTG CGCCGTACCC CCTACGCGGT GGTGCTTCTT
GACGAGATGG AGAAGGCGCA TCCGGATATC TTCAACGTCC TGTTGCAGGT CATGGACTAC
GCCACGCTCA CGGACAATAC CGGGCGCAAG GCCGACTTCC GCAATGTCGT GCTCATCATG
ACCTCCAATG CGGGGGTGCG CGAGATGTCC GCCCCGAGTA TCGGCTTCAC GGGTGGCGGC
GTCGAAGATG TGACTGCCAA GGGCCGCAAG GCCGTGGAGA CGCTGTTCAG CCCCGAGTTC
CGCAATCGCC TTGACGCGCT GGTGCCATTC GGCAGTCTTG CGCCGGAGGT CATGGAGCGC
ATCGTGGACA AGTTCGTGCG CGAGGTCGAG AACGGCCTGC GCGAGCGCCG GGTGCGGCTC
GAACTCACCG CTGCGGCGCG GCAGCGCCTT GCCGAGAAGG GCTTCGACCC GGCCTTCGGT
GCCCGCCCCC TGCGACGGGT CATCCGCACC GCCATCGAAG ACGAACTGGC GAAGGAGATG
CTGTTCGGCA GACTGCGCAA GGGGGGCACC GTGCATGTCG ACGCGCTTCC GCAAGCCCCG
AAGACCGCAG GCGTTGCGGG GCAGGGCGGC GCGACTCCCG ATGCGGCATC ACTGGGCCTT
CAGTTCAGCT ATCGCGAGCG TGGCGAGGGG AGCGCCGAAC CTGCGGCATG A
|
|---|
| Protein sequence | MIGKRLQAAL NAAVGEVRVR NHEYLTLEHL LYAIAGEEQG KGILEGCGAD VTALRARLEE
FFGTHLESLP EDMTTEVVQT LGVQRVLQRA FRHIQSAGRP LVEIGDVLAA LFDEDDTYAV
YFLKTQGVSR LDVLEYISHA MPEADDDAMD GDDEGDGGAS TRADALAQYA TDLTARAREG
RIDPLIGRED ELERTVQVLS RRRKNNPLFV GDPGVGKTAI AEGLALRIAV GAVPESFRKA
RVYALDMGSL LAGTKYRGDF EARLKAVISE LSRQPDAILF IDEIHTIVGA GATSGGSMDA
SNILKPVLAS GAIRCIGSTT HEEYRNHFEK DRALSRRFQK IDIGEPTQEE CVEILKGLKE
HYEEHHAVRY TLPALRAAVE LSARYVNDRL LPDKAIDVVD EAGAAMRLRA GFKPGASVSV
QDVERVVARM AHVPPRSISS SDRDRLKTLE NDLGKAVFGQ EAAVAVVARS ILRARAGFGR
EDRPTGSFLF YGPTGVGKTE LARSLAKRLG VAFLRYDMSE YMEKHAVSRF IGAPPGYVGY
DQGGQLTEAV RRTPYAVVLL DEMEKAHPDI FNVLLQVMDY ATLTDNTGRK ADFRNVVLIM
TSNAGVREMS APSIGFTGGG VEDVTAKGRK AVETLFSPEF RNRLDALVPF GSLAPEVMER
IVDKFVREVE NGLRERRVRL ELTAAARQRL AEKGFDPAFG ARPLRRVIRT AIEDELAKEM
LFGRLRKGGT VHVDALPQAP KTAGVAGQGG ATPDAASLGL QFSYRERGEG SAEPAA
|
|---|
| |