| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1505 |
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| Symbol | |
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| ID | 4662207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 1792578 |
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| End bp | 1794008 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639819738 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_966949 |
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| Protein GI | 120602549 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.132062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000751094 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACTCG AACTTAGACA GCAACTCAAG CTGAGTCAGC AGCTTGTCAT GACGCCACAA
CTGCAGCAGG CCATACGCCT TTTGCAATTG TCACGTCTTG AGCTTGTCGA GACCGTTCAG
CAAGAGCTTC TTGAGAATCC GTTCCTTGAA GAAGGAATGG ATGAAGGCGC TGCATCTTCT
GCCTCAGAAG CCTCCTCGCG TAAGGACGAG TCTGCGCCGG AGGCGTATGA CAGGGAATTG
TCGCGTAATG CCGACTGGGA AGACTATCTT GGCGAATTCG CCAGTTCTTC GCGGCAGGCG
CAGGTGCGCG AAACTGAACT CCCCGAGGAG ATGACCGCGT TCGAGGCGCG CTATTCTGCC
CGCCCATCGC TTGAAGGGCA TCTCATGTGG CAGTTGCGTC TTTCGCGTCT TACAGAAGAC
CAGAAGGGCA TCGGTGAAAC CATCATCGGC AATATCGGCT CTTCGGGATA TCTTCAGGCT
TCTGTCGAAG ACATTGCAGA GATGTGTGGT GCCGATGCTT CCGAAGTCAT TCCGGTATTG
CACGCCGTCC AGCGTTTCGA CCCGGTAGGT GTTGCCTCGC GGACTCCGCA GGAATGTCTG
CTGATTCAGA TTGAAATGCT GGGCTACGAC CGCGACCGTG TTCTCGTCGA ACTCGTTCGC
GACCACCTCG AAGACCTTGA AACCCGCCGT TACAAGCCGC TGCTGCGCAA GTTCAAACTC
GACATGGATG ATCTCAAGGA ATACCTTGAT ATCATACAGT CTCTCGACCC CATGCCAGGT
TCGAGCTTCG GGGGCAGCGA CCCCATGTTC GTAAGCCCCG ACGTGTTCGT GTACAAATAC
GACGATGAAT TCGTCATCGT GCTTAACGAC GACGGGCTGC CCCATCTGCA ACTCAGTTCG
CTGTACGACC AGAGTCTTGC CGGTGTGACG GGCAAGGACA AGGACTTCGT GCAAGAGAAG
GTGCGTTCCG CGTCGTGGCT CATCAAGAGC CTCTATCAAC GGCAACGCAC CCTGTACAAG
GTCGTTGAAA GTATTATCAA GTACCAGAGG GGGTTCTTCG AGGATGGCGT GACCCGTTTA
CGGCCACTCA TCCTCAAGGA CATCGCCGAC GACATCAGTA TGCACGAGTC GACCGTGAGT
CGCATCACGA CGAACAAGTT CGTCGCCACG CCTCACGGTG TGTTCGAGCT CAAGTTCTTC
TTCAACAGTG CGCTCGAACT TGATGATGGC AGCCAGGTCG GTTCAGAGAG TGTCAAGGCT
CTGATCAAGA AACTCATCGG CGAGGAGAAT CCCAAGGAAC CTCTGAGCGA TGAGCGAATC
GGCGAGATAC TGAAGGAACA GCTTCAGGTT AATATTGCCC GGCGTACGGT TGCGAAGTAT
CGTACAGCCA TGAATATCCC CTCTTCGTCC AAGCGTAAGG AAGTTTTCTG A
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| Protein sequence | MALELRQQLK LSQQLVMTPQ LQQAIRLLQL SRLELVETVQ QELLENPFLE EGMDEGAASS
ASEASSRKDE SAPEAYDREL SRNADWEDYL GEFASSSRQA QVRETELPEE MTAFEARYSA
RPSLEGHLMW QLRLSRLTED QKGIGETIIG NIGSSGYLQA SVEDIAEMCG ADASEVIPVL
HAVQRFDPVG VASRTPQECL LIQIEMLGYD RDRVLVELVR DHLEDLETRR YKPLLRKFKL
DMDDLKEYLD IIQSLDPMPG SSFGGSDPMF VSPDVFVYKY DDEFVIVLND DGLPHLQLSS
LYDQSLAGVT GKDKDFVQEK VRSASWLIKS LYQRQRTLYK VVESIIKYQR GFFEDGVTRL
RPLILKDIAD DISMHESTVS RITTNKFVAT PHGVFELKFF FNSALELDDG SQVGSESVKA
LIKKLIGEEN PKEPLSDERI GEILKEQLQV NIARRTVAKY RTAMNIPSSS KRKEVF
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