Gene Dvul_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1388 
Symbol 
ID4664909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1689310 
End bp1690281 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content63% 
IMG OID639819618 
Productbiotin synthase 
Protein accessionYP_966833 
Protein GI120602433 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00378301 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCG CCATACAGCG CGATGAACTT CTGTATCTGC TCTACGAAGC CCCAGAACAA 
GAGCTTTTCG CACGGGCCGA CGCTGTCCGG CGCACTCACA AGGGTGAACA TGTCTTCGTA
CGCGGGCTGA TCGAATTCTC CAGCCATTGT GTACGCGACT GTCGCTACTG TGGCCTTCGG
CGCTCCAACT CCGCAGCACA CCGCTACAGG CTCACCCCGC GTGAAGTCAT CGACGCGGCC
CGTCTCGCCG TCGCAGGTGG CGCAGACACC ATCGTCCTGC AATCAGGAGA CGACCTCGCC
TGCGAGGCGT CGACCATCAC TGCGATGATT CGCGGCATCC GGGAGGAACT CGGAGTGGTC
GTCACCCTCG GTTGCGGCGA ACGCCCCCCA CGCGACTATG CCCTGTGGCG TGAAGCCGGG
GCCTCGCGAT ACCTCATGAA GCATGAGACC GCAGATGCGG CCCTCTACGC AAGACTGCAT
CCCGGCAGGA CACTGGAACA ACGGCTAGAA GCGCTCCGCA CGCTGCATGG ACTCGGCTAC
GAGATAGGCT CCGGCTTCAT CATCGGCATA CCGGGGCAGA TGCCCGAAGT GCTCGCCGAT
GACATTCTTC TGGCGCGTGA ACTTGGTGTG GAGATGTGTG GTGCCGGGCC GTTCATTCCA
CAGACGGAAA CACCGCTGGG TAGCGAGCCT CAAGGGTCTG CCGCTCTGAC ATTGCGGGTA
CTGGCCGCGC TGCGCATCGC CCTGCCCGAT GCGAACCTTC CGGCGACGAC GGCACTAGCC
ACGCTCGACC CCATCGGCGG GCAACGTGAC GGACTGCGCG CCGGTGCCAA CGTACTCATG
CCGGGTTTCA CACCAGACAC ACACAGGGCG CACTACCGCA TCTACGACAA CAAACACCGC
GTGGGCATGG ACGAGGCACG CGCAGCCATC GAAGCTGCGG GCCGCACACA TAGCCTGCGA
CGCGAGGCAT GA
 
Protein sequence
MMTAIQRDEL LYLLYEAPEQ ELFARADAVR RTHKGEHVFV RGLIEFSSHC VRDCRYCGLR 
RSNSAAHRYR LTPREVIDAA RLAVAGGADT IVLQSGDDLA CEASTITAMI RGIREELGVV
VTLGCGERPP RDYALWREAG ASRYLMKHET ADAALYARLH PGRTLEQRLE ALRTLHGLGY
EIGSGFIIGI PGQMPEVLAD DILLARELGV EMCGAGPFIP QTETPLGSEP QGSAALTLRV
LAALRIALPD ANLPATTALA TLDPIGGQRD GLRAGANVLM PGFTPDTHRA HYRIYDNKHR
VGMDEARAAI EAAGRTHSLR REA