| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1386 |
|---|
| Symbol | |
|---|
| ID | 4664869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 1686655 |
|---|
| End bp | 1687920 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639819616 |
|---|
| Product | hydrogenases, Fe-only |
|---|
| Protein accession | YP_966831 |
|---|
| Protein GI | 120602431 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
|---|
| TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.999103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGTA CCGTCATGGA GCGCATCGAA TATGAGATGC ACACTCCGGA CCCCAAGGCC
GATCCGGACA AGCTCCACTT CGTCCAGATC GACGAGGCAA AATGCATAGG CTGCGACACC
TGTTCGCAGT ACTGCCCCAC CGCCGCCATC TTCGGCGAAA TGGGCGAACC GCACTCCATT
CCCCACATCG AGGCGTGCAT CAACTGCGGC CAGTGCCTCA CGCACTGCCC CGAGAACGCC
ATCTACGAGG CACAGTCGTG GGTGCCTGAA GTCGAGAAGA AGCTGAAGGA CGGCAAGGTG
AAATGCATCG CCATGCCCGC CCCCGCCGTG CGCTATGCGC TGGGCGACGC CTTCGGCATG
CCCGTCGGTT CCGTCACCAC CGGCAAGATG CTCGCGGCCC TGCAGAAGCT CGGCTTCGCC
CATTGCTGGG ACACCGAGTT CACCGCTGAC GTGACCATAT GGGAAGAGGG TTCCGAGTTC
GTGGAACGCC TCACCAAGAA GAGCGACATG CCGCTGCCGC AGTTCACCTC GTGCTGCCCC
GGCTGGCAGA AGTATGCCGA GACCTACTAC CCCGAACTGC TGCCGCACTT CTCCACGTGC
AAGTCGCCCA TCGGCATGAA CGGCGCACTG GCGAAGACCT ACGGCGCAGA GCGGATGAAG
TACGACCCCA AGCAGGTCTA CACCGTCTCC ATCATGCCCT GCATCGCCAA GAAGTACGAA
GGTTTGCGGC CCGAACTGAA GTCCAGCGGC ATGCGCGACA TCGACGCCAC GCTGACCACC
CGTGAGCTGG CCTACATGAT CAAGAAGGCC GGTATCGACT TCGCGAAACT CCCCGACGGC
AAGCGTGACA GCCTCATGGG TGAATCCACC GGCGGTGCCA CCATCTTCGG CGTCACCGGC
GGCGTCATGG AAGCAGCACT CCGCTTCGCC TACGAAGCCG TCACCGGCAA GAAGCCCGAC
AGCTGGGACT TCAAGGCCGT GCGCGGTCTC GATGGCATCA AGGAAGCCAC CGTCAACGTC
GGCGGTACCG ACGTCAAGGT CGCCGTGGTA CACGGGGCCA AGCGGTTCAA GCAGGTCTGC
GACGATGTGA AGGCGGGCAA GTCGCCCTAT CACTTCATCG AATACATGGC CTGCCCCGGC
GGCTGCGTCT GTGGCGGCGG TCAGCCCGTC ATGCCCGGCG TGCTCGAAGC CATGGACCGC
ACCACCACCC GCCTTTACGC GGGCCTGAAG AAGCGCCTCG CCATGGCGAG CGCCAACAAG
GCATAG
|
|---|
| Protein sequence | MSRTVMERIE YEMHTPDPKA DPDKLHFVQI DEAKCIGCDT CSQYCPTAAI FGEMGEPHSI
PHIEACINCG QCLTHCPENA IYEAQSWVPE VEKKLKDGKV KCIAMPAPAV RYALGDAFGM
PVGSVTTGKM LAALQKLGFA HCWDTEFTAD VTIWEEGSEF VERLTKKSDM PLPQFTSCCP
GWQKYAETYY PELLPHFSTC KSPIGMNGAL AKTYGAERMK YDPKQVYTVS IMPCIAKKYE
GLRPELKSSG MRDIDATLTT RELAYMIKKA GIDFAKLPDG KRDSLMGEST GGATIFGVTG
GVMEAALRFA YEAVTGKKPD SWDFKAVRGL DGIKEATVNV GGTDVKVAVV HGAKRFKQVC
DDVKAGKSPY HFIEYMACPG GCVCGGGQPV MPGVLEAMDR TTTRLYAGLK KRLAMASANK
A
|
|---|
| |