Gene Dvul_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1344 
Symbol 
ID4664623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1639120 
End bp1639863 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content62% 
IMG OID639819574 
Producthypothetical protein 
Protein accessionYP_966789 
Protein GI120602389 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00606517 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.54274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGACG GCGAACCGTC CTCGCTGTTG CAGAGCGCGA AGCAGGATGG CACCCCTGTA 
GCCGGTGTGG ATGAGAAGCT TGGCACCATC ATTCCTGAAG GCATCATGCT TCGTGATGAA
GCTGGCAATC TGGTCGATGC CCGCAGCCTC ATGACCGTGC CGACCCTCGT AGCCCCGGTC
TATTATTCCT GCCCCACCGT CTGCAACATG TTGCAGAGTT CCATCGCGCG CGTACTGCCT
GCCCTCAACA TGAAGGCGGG GACAGAGTAC CGGGTGCTGT CGGTGAGTTT CGACGAACTC
GACACGCCCG AGTTGGCGTC GCACAAGAAG AAGAACTATC TGGCCGCCGT GGGTGGAGAC
TACCCCCCCG ACGGGTGGCG CTTCCTGACC GCCGACCTGC CCAATGTCCA GCGATTCATG
GATGCCATCG GCTTCCGGTT CACACGACAG GGGCGCGACT TCGTGCATCC GGTGGTCCTG
GTGGCGGTGT CCCCCGAAGG GCGCATCACC CGGTACCTGT ATGGCAACGG GTTTCTTCCG
TTCGACGTGA CCATGGCACT GCATGAAGCA GCCGAGGAGA AGGTGGGCCT GTCGCTACGG
CGTGCCGTCT CGTACTGCTT CACCTACGAC CCCAAGGGGC GCAAGTACGT CTTCGATGTG
ATGAAGGTGG CTGGCGTGGT CATTCTTTTC GGGGCGGGCG TCCTGTTGTT CGTGCTTCTA
CGCGGCGGAC GTCGCCGCAA CTGA
 
Protein sequence
MPDGEPSSLL QSAKQDGTPV AGVDEKLGTI IPEGIMLRDE AGNLVDARSL MTVPTLVAPV 
YYSCPTVCNM LQSSIARVLP ALNMKAGTEY RVLSVSFDEL DTPELASHKK KNYLAAVGGD
YPPDGWRFLT ADLPNVQRFM DAIGFRFTRQ GRDFVHPVVL VAVSPEGRIT RYLYGNGFLP
FDVTMALHEA AEEKVGLSLR RAVSYCFTYD PKGRKYVFDV MKVAGVVILF GAGVLLFVLL
RGGRRRN