| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1279 |
|---|
| Symbol | gatB |
|---|
| ID | 4663386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 1562291 |
|---|
| End bp | 1563721 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639819510 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
|---|
| Protein accession | YP_966725 |
|---|
| Protein GI | 120602325 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
|---|
| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCGT ACGAAGCCGT CATCGGTCTT GAAGTCCACG CCCAGTTGCG TACCCGGTCG
AAGCTGTTCT GTTCGTGTTC GACGGCCTTC GGGGCCGACC CCAACGCCCA TGTCTGCGAG
GTGTGCGCCG GTATGCCCGG TGTGCTGCCC GTGCTCAACG AGAAGGCCGT GGAGTTCGCC
GCACGTATGG GGATTGCCGT GGGGTGCACC GTGAATCGCA CCTCGGTCTT CGCCCGCAAG
AACTACTTCT ATCCCGACCT GCCCAAGGGG TATCAGATTT CGCAGTACGA GCAGCCCATC
TGCGAGCATG GGCATCTCGA CATCTCCGTG GGCGACGCGG TGAAGCGCAT CGGCATTACG
CGCATCCATC TCGAGGACGA CGCGGGCAAG AACATCCACT CCGCAGGCGA GAACGTGAGC
TACGTCGACC TCAACCGTAC AGGGGTTCCG CTCATCGAAA TCGTGAGCGA ACCCGACCTG
CGAAGTGCGG AGGAGGCGGT GGCCTATCTC AAGGCCCTGC GTGCCATCGT GGTGCATCTT
GGCATCTGCG ACGGCAACAT GGAGGAGGGC AGCTTCAGGT GCGACGCCAA CGTGTCGTTG
CGTCCGCGTG GTGCCGCCGA GTTCGGTACA CGCGCCGAAC TGAAGAACCT GAACTCGTTC
AGGCATGTGC AGCGTGCCAT CGAGTACGAG ATATCCCGTC AGGCCGACCT GCTGGACGAT
GGCGACAAGG TCGTGCAGGA GACGCGCCTG TACGACAGCG TCAAGAACAT CACCGTCTCC
ATGCGTGGCA AGGAAGAGGC GCACGACTAC CGCTACTTCC CCGACCCCGA CCTCATCCCC
ATCCACATCG ACGAGGCGCG TCTGGCCGAA TGGCAGGCCA CGTTGCCCGA ACTGCCGCAG
GCACGGCTTG AGCGGTTCAT GTCGTCGTTC GGCCTTTCGG CGCAGGATGC CGAGGTGCTC
ACGGCGGAAC GTGACCACGC CGAGTTCTTC GAGGCCGCCG TGAAGCTGTA CGACCAGCCC
CGCAAGATCG CCAACATGAT GCTCGGGCCG TTGCAGCGTG AACTCAATCA GCGCGGCACC
TCGCTCGCCG TCTCTGCCAT GCGTCCCGAG GCACTTGCCG AACTTGTGCG CATCATCGAT
GCGGGGCTCA TCAGTGCCAA GATAGGCAAC GACGTGTTCG GCGAACTGTT CGAGAACGGT
GCCATGCCGG AAGCGTTCGT GCGTGAGCGC GGTCTGGTGC AGATTTCCGA TACGTCGGCC
ATCGAACAGG CGGTGGATGA GGTCATTGCC GAGAATCCTG CCGAAGTCGA AGCCTACAGG
GGCGGCAAGA CCAAACTCGT GAGCTTCTTC GTGGGGCAGG TCATGCGCAA GACGCGCGGC
AAGGCCAATC CTGCGCTCGT CAACGAACTT CTTGCTTCCA AGCTTGGCTA G
|
|---|
| Protein sequence | MASYEAVIGL EVHAQLRTRS KLFCSCSTAF GADPNAHVCE VCAGMPGVLP VLNEKAVEFA
ARMGIAVGCT VNRTSVFARK NYFYPDLPKG YQISQYEQPI CEHGHLDISV GDAVKRIGIT
RIHLEDDAGK NIHSAGENVS YVDLNRTGVP LIEIVSEPDL RSAEEAVAYL KALRAIVVHL
GICDGNMEEG SFRCDANVSL RPRGAAEFGT RAELKNLNSF RHVQRAIEYE ISRQADLLDD
GDKVVQETRL YDSVKNITVS MRGKEEAHDY RYFPDPDLIP IHIDEARLAE WQATLPELPQ
ARLERFMSSF GLSAQDAEVL TAERDHAEFF EAAVKLYDQP RKIANMMLGP LQRELNQRGT
SLAVSAMRPE ALAELVRIID AGLISAKIGN DVFGELFENG AMPEAFVRER GLVQISDTSA
IEQAVDEVIA ENPAEVEAYR GGKTKLVSFF VGQVMRKTRG KANPALVNEL LASKLG
|
|---|
| |