| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1250 |
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| Symbol | |
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| ID | 4664773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 1529644 |
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| End bp | 1531260 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639819481 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_966696 |
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| Protein GI | 120602296 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.20799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCGAC AGATCCACCT TTACGACACG ACACTGCGGG ATGGCTCGCA GTCCGAGGAC
ATCAACCTCA ATACCCCGGA CAAGCTCAAG ATTGCGCTGC GCCTTGATGA ACTGGGCATC
GCGTACATCG AGGGCGGCTG GCCTGGGTCC AATCCGGTGG ACGTCGCCTT CTTCAAGGAA
ATTCGCAACT ACAACCTCAA GCAGGCGAAG ATCAGCGCCT TCGGCAGTAC GCACCACCCG
TCGCATACCG CCGAGAACGA CCCGAACCTG AAGGCCATCG CGGCGGCACG CACTGACGCC
GCCGCGATCT TCGGCAAGTC GTGCGAACGC CATGCCCGAG AGGCCCTGCG CCTCGACGGA
CGGCGCAACC TCGACATCAT CCACGACTCG ATCGCCTTCC TGAAGAAGCA GGTCGCCGAG
GTGTTCTTCG ATGCCGAGCA CTTCTTCGAC GGGTACAGGC ACAATGCCGC CTACGCCCTC
GAAGTGCTGC GACGCGCCCA TGAAGCCGGA GGCGACGTGC TGGTACTGTG CGACACCAAC
GGCGGAACCC TGCCCCACGA GGTGCACGAC ATCGTCACCG CCGTGCGCGA GCAGCTGCCG
GAGGCGAAAC TCGGCATCCA TGCCCATAAC GACTGTGAAG TCGCCGTCGC CAACAGCATC
GCGGCCGTCC AGGCAGGGGC CGTTCAGGTG CAGGGCACCA TGAACGGCGT GGGTGAACGC
TGCGGCAACG CCAACCTCTC GTCGGTCATC CCCATTCTCG AACTCAAGAG CGCCGGGGCG
TACGCCTGCC TGCCGGAAGG CAGGTTACAG CAACTCACCG CCGTGTCCTC CTATGTCTCG
GAGGTGACCA ACCTGCCGCC CTTCAGCCGG CAGCCCTTCG TGGGGCGTTC TGCCTTCGCC
CACAAGGGGG GGGTGCACGT GAGTGCGGTG AACCGCAATG CCACTCTCTA CGAGCACATC
ACCCCCGAGT CGGTGGGCAA CCACCAGAGA GTGCTCATCA CCGAACTTGC GGGACGCAGC
AACATCGTCT CGCTGGCGCG TCGCTTCGGG TTCCATCTGG ACAAGGATGA GCCCGTTGTG
AAGGGCCTCA TGAACGAGCT GAAGAAGAAG GCCAGCCTCG GCTACGACTA CGCAGCGGCG
GAAGCCAGCG TGGAGTTGCT CCTGCTGCGC AAGCTGGCGC GGCGCGGGGT TCGCGAGTTC
TTCAAGCTCA TCCAGTTCAG GGTACTCGAA TCGAAGCAGG AGAACGACCT TGAGCCCATG
TCCGAAGCCT CGGTCATGGT CGAGGTCGAG GGCATCATCG AACACACGGC AGCCACCGGG
CGCGGCCCGG TGAACGCCCT CGACAACGCC TTGCGCAAGG CGCTGTCGAG CTTCTACCCG
CGCATCCGCG AGATGCGTCT GCTGGACTTC AAGGTACGGG TGCTCACCGG GACGGAGACC
GACGGTGGTA CCGCCTCCAC CGTGCGGGTG CTCATCGAAT CGGGTGACGC AGACAGCCGC
TGGGTGACAG TGGGCGTCTC ATACAACATC ATCGAAGCCA GCTGGCAGGC CCTTGCCGAC
TCAATGACGT ACAAACTCTA CAAAGACGAA CATGTCCAGC GGGGCATGAC AGATTGA
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| Protein sequence | MRRQIHLYDT TLRDGSQSED INLNTPDKLK IALRLDELGI AYIEGGWPGS NPVDVAFFKE
IRNYNLKQAK ISAFGSTHHP SHTAENDPNL KAIAAARTDA AAIFGKSCER HAREALRLDG
RRNLDIIHDS IAFLKKQVAE VFFDAEHFFD GYRHNAAYAL EVLRRAHEAG GDVLVLCDTN
GGTLPHEVHD IVTAVREQLP EAKLGIHAHN DCEVAVANSI AAVQAGAVQV QGTMNGVGER
CGNANLSSVI PILELKSAGA YACLPEGRLQ QLTAVSSYVS EVTNLPPFSR QPFVGRSAFA
HKGGVHVSAV NRNATLYEHI TPESVGNHQR VLITELAGRS NIVSLARRFG FHLDKDEPVV
KGLMNELKKK ASLGYDYAAA EASVELLLLR KLARRGVREF FKLIQFRVLE SKQENDLEPM
SEASVMVEVE GIIEHTAATG RGPVNALDNA LRKALSSFYP RIREMRLLDF KVRVLTGTET
DGGTASTVRV LIESGDADSR WVTVGVSYNI IEASWQALAD SMTYKLYKDE HVQRGMTD
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