Gene Dvul_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1193 
Symbol 
ID4664599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1463198 
End bp1465123 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content65% 
IMG OID639819425 
ProductABC transporter related 
Protein accessionYP_966640 
Protein GI120602240 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.280066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00112176 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCATTAC TCAGTCTTCA GAATATCACG CTCAATCTTG GCGGTCGGCC CTTGCTCGAC 
GGCGCGACAC TGCACGTCGA GGCGGGCGAG CGCCTGTGCC TCGTGGGGCG CAACGGTGCG
GGCAAGTCGA CACTGTTGCG TCTGATGGCG GGTGACCTGC GCCCGGACGC GGGCGAAGTC
GTCCGTGCCC AGGGTACGCG CTTCGGGCAT ATGCCGCAGG ATGTCCCGGC ACATCTCTCG
GGGTCGGTCT ACGAGGTCGT GGCGGAGGGC ATGGGGCCTG ACGGAGTGGC CCTTGCCGCC
TACCACAGGC TGGAGACCGG GCACGCCGAC TCCGACACGC TTGATGCCGC GCGGCACCAC
CTCGATACGG GCAACGGATG GGAACGGCAT GGAGACATGA TGACCGTGCT CAACCACTTG
CACCTCGACC CCGACGCGCG CTTCGAAGAA CTTTCCGGCG GACTCAAGCG GCGTGCCCTG
CTGGCGCGCG CCCTTGTCTC CTCTTCGGAC GTGCTGCTGG ACGAACCCAC GAACCATCTC
GACATCGAAG CCATATCGTG GCTTGAGGAC TTTCTTCAGC GCAGGGCCCG CACCCTCGTC
TTCGTCACTC ACGACCGTAC CTTCCTGCGA CATCTGGCCA CCCGCATCGT CGAACTCGAC
CGCGGGCAAC TCTTCGCCTA CGACTGCGGG TACGATGCCT ACCTCGAACG GCGTGAAGAA
CGGCTTGAGA ACGAGACGCG GCAGAATGCG CTCTTCGACA AGAAGCTGGC GCAGGAGGAG
GCGTGGATAC GGCAGGGGGT CAAGGCCCGG CGAACCCGCA ACATGGGGCG CGTCCGCGCG
TTGCAGGCCC TTCGGTCTGA ACGGGCCGAA AGGCGCGAGC GCATGGGGAC GGCAGCCATG
CGGGTGCATG AGGCGGAACG TTCGGGCAAG CTGGTCATCG AGGCCACGGG CGTGACCTTC
GCCCACGGCG ACAGTGAACC TGTGTTGCGC GACGTGGATG TCTGCATCCA GCGGGGCGAC
CGCGTGGGGC TCATCGGCCC CAACGGTGCG GGCAAGACGA CTCTTCTGCG CATCCTGCTG
GGCGACCTTG AACCGCAACA GGGCCGGGTG CGGCACGGTA CGCGCCTTGA AGTGGCCTAC
TTCGACCAGA TGCGCGAAGC GCTCGACATC GACGCCAACG CCATGGACAA CGTGGCGAAC
GGCAACGACA GGGTGACGGT CAATGGCGTC AACCGCCATG TGGCGGGGTA CCTGCGCGAA
TTCCTCTTTG ATGATGACAG GATGCGTATC GCGGTGCGCC ACCTGTCGGG CGGCGAGCGT
AACAGGCTGC TGCTGGCCCG CCTCTTTCTG CGCCCTTCCA ATGTGCTGGT GCTCGACGAA
CCCACCAACG ACCTCGATGT CGAAACGCTG GAACTGCTTG AGGAGTTGCT CACCGACTAC
AGCGGAACAG TGCTGCTGGT CAGCCACGAC AGAACCTTTC TCGACAATGT GGTGACAAGC
ACCATAGCCC TTGAAGGGCA GGGCATCGTG CGCGAATACA TCGGCGGGTA CGAAGACTGG
CTGCGTCAGC GCGACGAACC GCAACGCCCG GCGCGTGAGG CGCGTGATGT GGCGACTGCG
ACACAGCCAG CCGAGCGCCG CGCGGTCGAC ACCCGTCCCC GCAAGCTCAC ATTCAAGGAA
CAGCGAGAAC TTGCCGAGGC GCGTGACGAA CTGGAGCAGC TTCCGGCAAG GCTTGAAGCC
CTTGAGACCG AGCAGGCGGT TCTGGAACGG CGACTCGCCG ACCCCGCGTC GTTCGGCAGC
GACATGTCCG CCCTCACTGA AGCGGGAGAA CGCCTTGCCT CTCTGGAGGA GCAGCAGCTG
ACACTGCTGG AACGGTGGGA AGAGCTTGAA GCCCGCATTG CAGAACTGGA GATGTGCCGC
AGTTGA
 
Protein sequence
MALLSLQNIT LNLGGRPLLD GATLHVEAGE RLCLVGRNGA GKSTLLRLMA GDLRPDAGEV 
VRAQGTRFGH MPQDVPAHLS GSVYEVVAEG MGPDGVALAA YHRLETGHAD SDTLDAARHH
LDTGNGWERH GDMMTVLNHL HLDPDARFEE LSGGLKRRAL LARALVSSSD VLLDEPTNHL
DIEAISWLED FLQRRARTLV FVTHDRTFLR HLATRIVELD RGQLFAYDCG YDAYLERREE
RLENETRQNA LFDKKLAQEE AWIRQGVKAR RTRNMGRVRA LQALRSERAE RRERMGTAAM
RVHEAERSGK LVIEATGVTF AHGDSEPVLR DVDVCIQRGD RVGLIGPNGA GKTTLLRILL
GDLEPQQGRV RHGTRLEVAY FDQMREALDI DANAMDNVAN GNDRVTVNGV NRHVAGYLRE
FLFDDDRMRI AVRHLSGGER NRLLLARLFL RPSNVLVLDE PTNDLDVETL ELLEELLTDY
SGTVLLVSHD RTFLDNVVTS TIALEGQGIV REYIGGYEDW LRQRDEPQRP AREARDVATA
TQPAERRAVD TRPRKLTFKE QRELAEARDE LEQLPARLEA LETEQAVLER RLADPASFGS
DMSALTEAGE RLASLEEQQL TLLERWEELE ARIAELEMCR S