| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1166 |
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| Symbol | |
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| ID | 4663531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 1425038 |
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| End bp | 1428496 |
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| Gene Length | 3459 bp |
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| Protein Length | 1152 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639819396 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_966613 |
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| Protein GI | 120602213 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.638752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGA ATCCGCAACT GCTTCAGATA AAGGCATCCG CCGGGTCGGG GAAGACATAC
ACCCTTACCC GGCGGTTCCT CGAATTGCTA GGCACAGCGC AACAGGACGG TTCCACCGGC
CCTGCCTGCA CCCTCTCCGC CGATGGTCGG CATTGCTGGC CAGAGATACT TGCCGCCACC
TTCACCAACC GCGCCGCCAC GGAGATGAAG GAACGGGTGG TGCGGCGACT CAAGGAGATG
GCACTGCGAA CCGGCGAGTC GCCCGAAGCC CCGTGGACGC CAGCCCTTGC GGACCGATGG
GTGGGGACGA TACTGCGACA GTACGGTGCC CTGAACATAC GTACCATCGA CAGCCTTCTC
ACCCTGCTGG TGCGTCTCTC GGCCCTCGAC CTCCGCCTGC CGCCCGACTT CGAACCGGCC
TTCGCAGGCC CGGACTTCTT CGAACCGCTT CTCGACGATG TGCTGGAAAC GGCCCGCCAC
GACGACCCCG CCCTGCGCGA CATGCTTCGC CGTGCCTGCG AGACCCTCAT CCACCATACG
GACCACAAGG GCTTCGCCAC CGGCGAGAAG CTGCGGGCAC GGCTTCTTGA GCTTCTGGAA
TGGCATCTTT GCAACGGCGA CCTGCCGACG ACGGATGCAG ACACCGTGCG TGCCCACCTT
GTCACGCTGC ATGAACGGGC ACGGCAGGGT GCGACGACCC TCACGCGCGT GACGGCCGAC
GAGAACCTCG CCGTGGCGGC GAACTTCCTG AAGTTCCTCG TCAAAGTCGA AGAATCGTCA
CCGTTCGCCA AAGTCCCCGA ATCGGCCTAT CTCCATAAGA CGAACCTCGA CGAGTGCCTC
AACAAGGCTT CGCGCGGCAA CGCCTCCGCA CAAGCGGAGA GTGCCTTCTC GGCGTTCATG
GCCGCCCTCG CCGCCTTCCG CACACGCGGA AGGCTTCTGC AACGCGCCCT CGCCATCATG
CCCCTTGTGG GCATTGCCGA AACGCTGGCC CGCAGGCTGC CCGACTATCA ACTGCGCGAG
GGAAAGGTCC CCGCGCAATT GCTGCCCCAG ATGGCGCGCC GGGTGCTCGA TGGCGAATAC
GGGGTCTCCG AGGCGTTCTG CCGCATGGGC ACACGGCTGG CGCACATCCT CGTCGACGAA
TTCCAGGATA CCAGCAAGGA CCAGTGGGCA GCCATCCAGC CCCTTGCCGT CGAGTGCCTG
TCGCGCGGGG GCAGTCTCAC ATGGGTAGGA GACGTCAAAC AGGCCATCTA CGGCTGGCGC
GGTGGAGATT CCGCCCTGTT CGACGCCGTC CTGCGGGATG GCGAACTTCT GGCCATCGCC
GGAGACGGCA TCTCCGGCAC GCTGCCGCGC AACTGGCGCA GCCGCCCCGA AATCGTCCAC
TTCAACAACG ACGTCTTCGC CCTTCTGGGC GACGAGGCCC ACGCTACGAC TGTGCTGCGC
GCCATGCTGC CGGAGGGCAC CCCGCCCGAC GTCTTCAGTG AAGCCGTCGA TGAGCTTGCG
CGGGCCTTCA CCGGGGCCGC GCAGGAGACG CCCCCCCGTG GGGACGACGA GTCACAAGAA
GAAGGCTTCG TGCGCCTCAC GCACGTCGCG GCATTCGACA GTGAAGAACT CGATGCCGAG
GTCAAGACGA CCCTTCGGTC GCTCTTCATG GGCGACCTCG CCCTCCGCCG CCGCTGGCGC
GACGTGGCTG TGCTGGTGCG TACCAACGGA GAGGCGGGCC GCGTCGCCAC GTGGCTCATG
GAGTGGGACA TCCCCGTCGT CACCGAGAAC AGCCTGCGAC TGGCCGACCA TCCGCTGATT
TCGCAGACTG TGGCGCTTCT GGGCTTTCTC GACTACCCGC GTGACGACCT CGCCTTCTGG
GAATTCGCCG CAGGGCCCGA ACTCCTGGGC GATGCAGCGG GGCTTGACGC CCCCGCCATG
GACGACTGGC TGGCAGAGGG CGGGCGCGGC CCGCTGTTCA CACGCTTTCG TGACGCCTTT
CCCGCCGTCT GGCGGCGCTG GATAGCCCCG TTCTACAGCC GTGCCGGACT CATGAGCGTG
TATGACACGG TACGCGAAGT CTACACCCGC TTCCGGGTCT TCGACCGCTA CCCGGAGGAC
GCCGGATTCC TCCGCCGTTT CCTCGAAGTC GTGCATGCCG CCGAAGGACA AGGCCTTGTC
TCGCTTTCGA CCTTTCTCGA CTTCTGGAAA CGCACCGGCG GGGACGAGAA GGTGCCCATG
CCGGAAGGGA TGGACGCCGT GCGCGTCATG ACCATGCACA AGGCCAAGGG GCTGGAGTTT
CCCGTGGTGG TCATCCCCTT CCACCATCAG GCGGACAGGG CCGACGACAC TCCCGTCCGG
ATGGAAGTCG AAGGACTCGA CCTGCTCGTG CCTCGCTGCC CGGAGATGGG AAAGCCCTAC
TACGAGGCCT TCGCAGCTTC GGTACGTGAG CAGCTGCACG TGCTCTATGT GGCATGGACG
CGCCCCGTCG AAGAACTGCA CGCCTTCATC ACCGAAAGGA AGACAGGAAA GGGCAGGTCT
GCCCTGCTTG AAGGGCTCAA GGTACTGCTC GGTCTTTGCG GCGTGCCCGA AACGTGGGGC
ACATGGGAAC GGGGCACGAT TCCGGCATCT GCCCTCGCCG ACTCGACGAC GGAGACCATG
CCTGAAGGGA GACCAGACCA GCCCGAATCG ACGCCACATG CCATGGCATC TCCGACGCTG
GCGGATTCTG CCCCTGCGGA CGCTGCCCCT GTCGTGCTGG CACCGGCAGC GCAAACGGTA
CCACCCCCGC AACCTGCTGC GTCTGCCTGC GCTTCGGAGA CCGCCCCGCA AGCCACAGGG
CATGACACCC CGTCGCTCAT GGTGGACGCA GCGGCATCCA TACCCGCCCC GGCATCGACA
CCGGATGACG ACTGGCGCCC CATGCAATGG CTGCCCCGTC TGAAGATCTT CCGCAACCAG
CTAGAAGAGT TCACCTTCAC CGAACGCAGG CGCGGCATGC TCGTCCATGC GTGTCTTGAG
GCGCTGCACC CCACAGGCGC CCCGCGAGAG GACGCCGCCC GCGCCGTGCG CCATGGCATA
AGGGCCTTTC CGTTGCCCGT CCCCGATGAG GACGCCGTGG CGGCGGAATT GACCACCATG
CTGGAATGGT ATGCCGCGCA GCCTGAAACG GCGCACTGGC TACGCCACGG CACGCCAGAA
CAGGGCATCC TCGACGCTCA GGGCAGGCTG CACCGCACCG ACCTCTTTGT CGATGACGGC
AACGTGCGCG TCGTCGTCGA ATACAAGACC GGAGCCCCTT CGCCCGACCA CATCGAGCAG
GTGCACCGCT ATCTCTCGCT GCTTCTGGAT GCCGACCCCC GCCCCGTCCA CGGCGTACTC
GTCTACCTCG ACCGCCGCAC AACGCAGCGC ATCGACCCCG CCGAGTCCGG TGACACCAGC
AACACCATCG CCCACCCCGC CGAGGCCCGC CGACCATGA
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| Protein sequence | MIENPQLLQI KASAGSGKTY TLTRRFLELL GTAQQDGSTG PACTLSADGR HCWPEILAAT
FTNRAATEMK ERVVRRLKEM ALRTGESPEA PWTPALADRW VGTILRQYGA LNIRTIDSLL
TLLVRLSALD LRLPPDFEPA FAGPDFFEPL LDDVLETARH DDPALRDMLR RACETLIHHT
DHKGFATGEK LRARLLELLE WHLCNGDLPT TDADTVRAHL VTLHERARQG ATTLTRVTAD
ENLAVAANFL KFLVKVEESS PFAKVPESAY LHKTNLDECL NKASRGNASA QAESAFSAFM
AALAAFRTRG RLLQRALAIM PLVGIAETLA RRLPDYQLRE GKVPAQLLPQ MARRVLDGEY
GVSEAFCRMG TRLAHILVDE FQDTSKDQWA AIQPLAVECL SRGGSLTWVG DVKQAIYGWR
GGDSALFDAV LRDGELLAIA GDGISGTLPR NWRSRPEIVH FNNDVFALLG DEAHATTVLR
AMLPEGTPPD VFSEAVDELA RAFTGAAQET PPRGDDESQE EGFVRLTHVA AFDSEELDAE
VKTTLRSLFM GDLALRRRWR DVAVLVRTNG EAGRVATWLM EWDIPVVTEN SLRLADHPLI
SQTVALLGFL DYPRDDLAFW EFAAGPELLG DAAGLDAPAM DDWLAEGGRG PLFTRFRDAF
PAVWRRWIAP FYSRAGLMSV YDTVREVYTR FRVFDRYPED AGFLRRFLEV VHAAEGQGLV
SLSTFLDFWK RTGGDEKVPM PEGMDAVRVM TMHKAKGLEF PVVVIPFHHQ ADRADDTPVR
MEVEGLDLLV PRCPEMGKPY YEAFAASVRE QLHVLYVAWT RPVEELHAFI TERKTGKGRS
ALLEGLKVLL GLCGVPETWG TWERGTIPAS ALADSTTETM PEGRPDQPES TPHAMASPTL
ADSAPADAAP VVLAPAAQTV PPPQPAASAC ASETAPQATG HDTPSLMVDA AASIPAPAST
PDDDWRPMQW LPRLKIFRNQ LEEFTFTERR RGMLVHACLE ALHPTGAPRE DAARAVRHGI
RAFPLPVPDE DAVAAELTTM LEWYAAQPET AHWLRHGTPE QGILDAQGRL HRTDLFVDDG
NVRVVVEYKT GAPSPDHIEQ VHRYLSLLLD ADPRPVHGVL VYLDRRTTQR IDPAESGDTS
NTIAHPAEAR RP
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