Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0891 |
Symbol | |
ID | 4663846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 1097180 |
End bp | 1099870 |
Gene Length | 2691 bp |
Protein Length | 896 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639819114 |
Product | surface antigen (D15) |
Protein accession | YP_966339 |
Protein GI | 120601939 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAACA CCGCCCGTAG GGGCCTCATT CTCGCGTTCC TGTTGCTCCT TCTTGTGCAG GTGGGCCTTG TGCAGGCAGC ACCCGCCGTG CAGGAGACCA CCATCATGGT GCTGCCCTTT CAGGTGAACG CGGGCAAGGA CCTCGAGTAC CTGAACGAAG ACCTGCCCGA ACTCGTGGCC CAGCGCCTTG TTGCGCGCGG GCTGCACGTG CTTCCCCAGT CGGACGTCAA GGCCATACTG CGCCGCCAGC GCGTGACCGA ACTCGACATC GCCTCGGCGC GCAACCTCGC GGTCATGGCG CAGGCAGGGT ACACGGTGTA CGGCAGCTTC ACCCAGCTGG GAGACAGCTT CAGCATAGAC CTGCGCGTTG TCGATGCCCT CGGCGTCAAG CCCGCCAAAC CCTTCTTCAT CCAGAAGCAG GGCATCATCA ACATCCTTCC CGCCGTCGAC GAACTGGTCG ACCGTGTGGC GGGCGAATTC ACCAGCGGCA ACGCCATCGC CGACGTGAAG GTGCGCGGCA CCAAGGTGCT TGACCCCGAC GTCGTGCTCA TGCGCCTCTC CACCCGCAAG GGCGACCCCA TCGACCCCGC CGCCATCAAC AAGGAAATCA AGCGCATCTG GGATCTCGGC TATTTCAGTG ACGTGCAGGC GAGTGTGGAG CAGGGCGGCG ACGGAACGGT ACTCGTGTAC ACCGTCACCG AGAAGCCGCG CATCGACAAC ATCGTCATCG AAGGCTCCGA CAAGGTCGGT CACGACGATA TCCTCGCTGC CATGAGCTCC AAGACGGGCT CGGTCCTCAA CGATAAACTC CTCGCGCAGG ACTTGCAGAA GGTCACGGAA CTCTATCGCA AGGAAGGCTT CTACCTCGCC CATGTGACCC ACCGCGTCGA GGCGCGTCAG GGGGCTGCCT CCGCCACGCT CGTGCTGAAC GTGGAGGAAG GCAACAAGCT CTATATCAAG AAGGTCAAAA TCGAGGGACT CAAGGAGCTT TCCGAGAGCG AAGTCAAGGA CATCCTCGCC CTTTCCGAGC GTGGCATGTT CTCGTGGTTC ACCGGCACGG GCGTCCTCAA GGACGAACTG CTTGAACGCG ACTCTGCCGC CATCACCGCC TACTGCCTCA ATCATGGCTA TGTCGATGCG CTGGTCTCCG CCCCCAAGGT CGACTATGAG GAGGACGGCA TCATCGTCTC CTTCGCAGTC AAGGAAGGGC CCCGTTACAA GCTTGGCAAG ATCGGCTTCG ACGGTGAACT TATCGATACC GACGAGCGGC TTCTGAAGGT CGTCAAACTC GACGACCACA AGAAGGACAA CCAGTACTTC GCCCTTGACG TGATGCAGAC CGACGACAAG CTGCTCAGCG ACTACTACGC CGACTACGGC TACGCCTTCG CCGAGATCAA TTCGCGCACA CAGAAGAGCG CCGAAGAGCA TGTCATCGAT GTGACCTACG TCATCCGCAA GCGTCAGAAG GTCTATATCA ACCGCGTGCT TGTCGAAGGC AACCAGAAGA CCCGTGACAA CGTGGTGCTG CGCGAGATGC GCATTGCCGA CGGCGACATG TTCGAAGGCG CCAAGCTGCG CCGTAGCAAC GAGCGTCTGA ACCGTACCCG CTACTTCTCG CAGGTGGACA CCGAACTCGT GCCCACGCAG AAGGAGGACG AGGTCGACCT CAAGGTGAAG GTCAAGGAAC AGAACACCGG TGCCCTGATA GGCGGTGTCG GCTATTCCAC CTTCTATCAG TTCGGCGTCA GCGGCACGAT CATGGAACGC AACCTGTTCG GCAAGGGCTA CTATGCCTCG CTGCAGGCGT TCTTCTCGGG CAAGCGCAAC TCCTTCATCG CCTCGTTCAC CAACCCCCGC GTCAATGACG GCGACCTGAG CTTCGGCAAC GACGCCTACA TCTCGCGCGA GTACTTCGAC GACTTCAGCA AGAACACCAT TGGTGACACC ATCCGCTTCG CCCTGCCTGT GGGCGAATAC AGCACCGTGG GCTGGGGCTA CCGCCTCGAC CGTTACGAAC TGTATGACAT CGATGACGAT GCCGCGAAGA TCATCAAGGA GCGTGAGGGC GAGAACATAT CCAGCGTCGC GCATGTCCGG TTCACCCGTG ACACCACCGA CAGCAAGGAG AAGCCCACCA AGGGTACCAT CTTCAAGACC TTCAACGAGT TCGGTGGCGG GCCCATCGGC GGTGACGACG ACTTCATCAA GCCTGTCGTC GAGTTCCAGG CCTATCACCA GCTTGCCCCC AACCACGTGC TCCATGGTCG CACCCGTGGT GGTGCCGTGC TGGAGAACGG GCAGGGCGAC GTCCCCGTGT TCGAACGCTT CTACATCGGT GGCATCGACA GCATCCGCGG GTACAACTCG CGTGACATCT CGCCGCGTGA CCCCGAATCG GGCGACCGCA TCGGCGGCGA CCGTATGGCC TTCGTCAACC TCGAATACAT CTGGGTGTTC AAGCCCGACC TCGGCCTCGC GCTGGTGCCC TTCTTCGACA TGGGCATCAA CTATGACTCG TCCGCCGAAT TCAACTGGGA CGACGAGCTG AAGAAGTCCG TGGGTCTCGA GATGCGCTGG CGTTCGCCCA TGGGCGACCT GCGGTTCGCC TATGGCTTCC CTCTCGACGA GGGACGCGAC GGAGAACAGC ATAGCGGTCG CTTCGAATTC TCGATGGGCC AGTTCTTCTA G
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Protein sequence | MTNTARRGLI LAFLLLLLVQ VGLVQAAPAV QETTIMVLPF QVNAGKDLEY LNEDLPELVA QRLVARGLHV LPQSDVKAIL RRQRVTELDI ASARNLAVMA QAGYTVYGSF TQLGDSFSID LRVVDALGVK PAKPFFIQKQ GIINILPAVD ELVDRVAGEF TSGNAIADVK VRGTKVLDPD VVLMRLSTRK GDPIDPAAIN KEIKRIWDLG YFSDVQASVE QGGDGTVLVY TVTEKPRIDN IVIEGSDKVG HDDILAAMSS KTGSVLNDKL LAQDLQKVTE LYRKEGFYLA HVTHRVEARQ GAASATLVLN VEEGNKLYIK KVKIEGLKEL SESEVKDILA LSERGMFSWF TGTGVLKDEL LERDSAAITA YCLNHGYVDA LVSAPKVDYE EDGIIVSFAV KEGPRYKLGK IGFDGELIDT DERLLKVVKL DDHKKDNQYF ALDVMQTDDK LLSDYYADYG YAFAEINSRT QKSAEEHVID VTYVIRKRQK VYINRVLVEG NQKTRDNVVL REMRIADGDM FEGAKLRRSN ERLNRTRYFS QVDTELVPTQ KEDEVDLKVK VKEQNTGALI GGVGYSTFYQ FGVSGTIMER NLFGKGYYAS LQAFFSGKRN SFIASFTNPR VNDGDLSFGN DAYISREYFD DFSKNTIGDT IRFALPVGEY STVGWGYRLD RYELYDIDDD AAKIIKEREG ENISSVAHVR FTRDTTDSKE KPTKGTIFKT FNEFGGGPIG GDDDFIKPVV EFQAYHQLAP NHVLHGRTRG GAVLENGQGD VPVFERFYIG GIDSIRGYNS RDISPRDPES GDRIGGDRMA FVNLEYIWVF KPDLGLALVP FFDMGINYDS SAEFNWDDEL KKSVGLEMRW RSPMGDLRFA YGFPLDEGRD GEQHSGRFEF SMGQFF
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