Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0888 |
Symbol | |
ID | 4663861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 1093753 |
End bp | 1095258 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639819111 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_966336 |
Protein GI | 120601936 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAAA GCCTCGAAGC CCGCGACGAG CTGAACGAGG TGGTGAAGAA CCGCGTCGTG AAGACGTGCG AACTTCTCGA CGCCGGAGTG TCGGCCTACC CGAACGGTTT CATCAAACAG CACGACATCG CACCGGTACT TGCCGAGTAC GAGGGGCTCG ATGCTGATGA GCTCGAAACG GTGGACGCCG CCTTCACGAT GGCGGGGCGC ATCGTGTCGC ACCGTTCGTT CGGCAAGGTG GCCTTCTTCC ATATAATGGA TCGCACGGGG CGCATGCAGT GCTATGCCGC GCGTGAGGAA CTTGGCGAAG AAGCCTACAA GACCTTCAAG AAGCTCGACA TCGGCGATAT CGTCGGCGTG AGCGGAAGGC TCTTTCGCAC CAAGACGGGC GAGCTCACGC TCTCCTGTAC CGAGGTGCGC CTGCTGACCA AGTCCATCCG GCCCCTCCCC GAGAAGTATC ACGGCCTCAA GGACGTGGAA ATCCGCTATC GCCAGCGCTA CGTCGACCTC ATCGTCACGC CGCGGGCCCG CGACATCTTC CGCAAGCGCA CGATCATCGT CCGTGAGTTC AGGCGCTTCC TCGAAGCCCG CGGTTTCATG GAAGTCGAGA CGCCGATGAT GCAGGCCATC CCCGGCGGCG CCACGGCAAA GCCGTTCGTC ACCTTCCACA ACGCGCTGGA TATGCAGCTC TACATGCGCA TCGCGCCAGA GCTCTATCTG AAGCGCCTGC TCGTGGGCGG TTTCGAGAAG GTCTTCGAGA TCAACCGCAA CTTCCGCAAC GAGGGCATAT CCACCCAGCA CAACCCTGAA TTCACCATGT GTGAGTTCTA CTGGGCCTAT GCCACGTTCG AAGACCTGAT GGACCTCACC GAGGAGCTGT TCTCGCACAT CGCGCGCGAG GTCTGTGGCT CTTCGGTCAT CACCTATCAG GGGCAGGAGG TCGACCTCAC GCCCGGCAAG TGGGTGCGTC TGACCTTCCA CGAGTCGCTT GAGAAGGTGG GTGGGCATTC CCCCGAGTTC TACAACGACT ACGAGAAGGT TCGTGCCTAC GTGCGTGAGC GTGGCGAGAA GGTGCTTCAG GGCGAGAAGC TGGGCAAGCT ACAGGCCAAG CTGTTCGACC TCGACGTGGA ACCCCGGCTC ATCCAGCCCA CGTTCATCTA CCACTACCCG ACCGACATCT CGCCCCTGTC GCGCAGGAAC GAGCAGAACC CGGACGTCAC CGACCGTTTC GAACTGTTCA TCACCGGGCG CGAACTCGCC AACGCCTTCT CTGAATTGAA CGACCCCGTC GACCAGCGCA TGCGCTTCGA GGACCAGGTC AAGGAGAAGG AGGCTGGTGA CGACGAGGCG CATTTCATGG ACGAGGACTA CCTGCGCGCG CTCGAATACG GTATGCCGCC CGCGGCTGGG CAGGGCGTGG GTATCGACCG CCTCGTCATG CTGCTGACCG ACTCGCCCTC CATCCGCGAG GTCATCCTCT TTCCGCTGCT GAAGCCGGAG AGCTGA
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Protein sequence | MLESLEARDE LNEVVKNRVV KTCELLDAGV SAYPNGFIKQ HDIAPVLAEY EGLDADELET VDAAFTMAGR IVSHRSFGKV AFFHIMDRTG RMQCYAAREE LGEEAYKTFK KLDIGDIVGV SGRLFRTKTG ELTLSCTEVR LLTKSIRPLP EKYHGLKDVE IRYRQRYVDL IVTPRARDIF RKRTIIVREF RRFLEARGFM EVETPMMQAI PGGATAKPFV TFHNALDMQL YMRIAPELYL KRLLVGGFEK VFEINRNFRN EGISTQHNPE FTMCEFYWAY ATFEDLMDLT EELFSHIARE VCGSSVITYQ GQEVDLTPGK WVRLTFHESL EKVGGHSPEF YNDYEKVRAY VRERGEKVLQ GEKLGKLQAK LFDLDVEPRL IQPTFIYHYP TDISPLSRRN EQNPDVTDRF ELFITGRELA NAFSELNDPV DQRMRFEDQV KEKEAGDDEA HFMDEDYLRA LEYGMPPAAG QGVGIDRLVM LLTDSPSIRE VILFPLLKPE S
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