| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0839 |
|---|
| Symbol | |
|---|
| ID | 4664071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 1030385 |
|---|
| End bp | 1031293 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639819061 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_966287 |
|---|
| Protein GI | 120601887 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0400765 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGAT GGTGGGACAG AGGCACCGGC ATTGCCGTGG CACAGCACCT CGTCCTCGTG
GGGTTTCTCC TGTTCGGCCT CGCGTCCGGT GGCGACGGCA AGCTTGAAGG TGATGGCGTG
GGGGGCGGTA GCCAGCTGAT GGAACTCTCT CTCGGCGGCC CGGGCATGGC TGCATCCAAG
CCCGCGCGTG CTGCACAGGC GACACAGACA CCCCCTGCGG CCCAACCTCC TGCCGCCCAG
ACGCCGCCGA CGCGCCCGCG CCCCGACGAC GCGACGGCGG TCAGCCCACG CAAGCGACGC
GTCGAAGCAA AGCCGCGTCC GAAGAAGGAA ATACTGCGTC GTGAGGTCGC ACAGCGTAAA
CCCGTGCCTC GCGCCGAAGA GAAGCGGGCA GTGGATACGC AGCCGACGCA AACGACATCC
ACGACCATCG CGCCCGAGTC GTCACACGAT GGTGACAGTG CAGTGGCGAA CACGGCACAC
GCAGGGGTAC CCGGCACAGC CAGCACTCCC GGAAGCGGAG GGCCGGATAA AGGCATGGCC
TATGGCACTG GGGGCGGGAC AGGCGGCGGG TCGACGGCAC ACGCGGGTAC AGGCGGAGAA
GGTCTTGGCG GCACGGGGGC AGGCACCGGC GGATACGACC GGGGGCCTCG CGCCGTTTAC
ACGCCGCGTC CGCCCTACCC CCGCGAGGCA CTGCACAAGG GTGCCGAAGG CGTGGTCATG
GTACGCCTGC TTCTCGACCC TTCGGGGCGG GTGGTGCAAA GCCGCATCGC CGGGGGCGAC
ATGGCTGACA TCTTCGCCGA AACCACGCTG GAGACGGTGG AACGCTGGCG TTTCAAGCCC
TGCGGCAGAC AAGGGCGCAA CGTGTCATGC GAGGTGGAGA TTCCCGTGGA ATTTCGCATC
GACCGCTGA
|
|---|
| Protein sequence | MNGWWDRGTG IAVAQHLVLV GFLLFGLASG GDGKLEGDGV GGGSQLMELS LGGPGMAASK
PARAAQATQT PPAAQPPAAQ TPPTRPRPDD ATAVSPRKRR VEAKPRPKKE ILRREVAQRK
PVPRAEEKRA VDTQPTQTTS TTIAPESSHD GDSAVANTAH AGVPGTASTP GSGGPDKGMA
YGTGGGTGGG STAHAGTGGE GLGGTGAGTG GYDRGPRAVY TPRPPYPREA LHKGAEGVVM
VRLLLDPSGR VVQSRIAGGD MADIFAETTL ETVERWRFKP CGRQGRNVSC EVEIPVEFRI
DR
|
|---|
| |