Gene Dvul_0782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0782 
Symbol 
ID4663534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp964882 
End bp965832 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content56% 
IMG OID639819004 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_966231 
Protein GI120601831 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.182086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTCC GCAAACGCGT ACTTGTCACG GGTGGAGCCG GATTCGTCGG CTCACACCTC 
TGCGATCGTC TGCTGAAAGA CGGGCACGAA GTACTCTGCG TCGACAACTA CTTCACCGGT
GCTCGCGCCA ATGTCGAACA CTTGCTGGAA AACAGGAGGT TCGAGCTCGT CCGCCATGAC
ATCACCTTTC CGCTGTACGT CGAAGTAGAT GAAATCTGGA ATCTGGCGTG CCCTGCCTCT
CCAGTGCACT ACCAGCACGA CCCCGTACAG ACGATAAAGA CATGCGTGCA TGGAGCCATC
AACATGCTTG GCCTCGCCAA ACGTGTCGGG GCACGGATTT TTCAGGCATC CACGTCAGAA
GTGTACGGCG ACCCGGCTGA GCATCCGCAG ACCGAAAACT ATTGGGGAAA TGTCGATCCC
ATAGGAATCC GCTCGTGCTA CGACGAAGGC AAGCGGTGTG CAGAAGCGCT CTTCTTTGCG
TATCATCGGC AAAACGGACT CGACATTCGG GTGGGCAGGC TTTTCAATAC CTATGGGCCT
CGCATGCATC CCAATGACGG ACGGGTGGTG TCCAACTTCA TCATGCAGGC GTTGCGAAAC
GAGCCCATCA CCATCTATGG AGACGGAAGC CAGACCCGTT CCTTCTGCTA CATCCATGAC
CTGATCGAGT GCATGATTCG CTTCATGGAT TTGCCACCGG GACTGCATGG ACCTGTGAAC
ATAGGCAATC CGGCTGAGTT CACCATCAGG GAATTGGCCG AAACCGTCAT TGACCTTGTG
GGTAGTCGAT CGACCATAGC TCATCTTCCG CTTCCGAGTG GCGACCCCCG GCAAAGACGT
CCGGATATAA GCACCGTACG CGAGAAACTG GGCTGGGAAC CGCAGACGCA GCTACGCGAA
GGATTGCGGC ATACCATTGC CTACTTCCAA GGGATGCTCG CCCCAAGCTA G
 
Protein sequence
MHLRKRVLVT GGAGFVGSHL CDRLLKDGHE VLCVDNYFTG ARANVEHLLE NRRFELVRHD 
ITFPLYVEVD EIWNLACPAS PVHYQHDPVQ TIKTCVHGAI NMLGLAKRVG ARIFQASTSE
VYGDPAEHPQ TENYWGNVDP IGIRSCYDEG KRCAEALFFA YHRQNGLDIR VGRLFNTYGP
RMHPNDGRVV SNFIMQALRN EPITIYGDGS QTRSFCYIHD LIECMIRFMD LPPGLHGPVN
IGNPAEFTIR ELAETVIDLV GSRSTIAHLP LPSGDPRQRR PDISTVREKL GWEPQTQLRE
GLRHTIAYFQ GMLAPS