Gene Dvul_0499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0499 
Symbol 
ID4664734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp638572 
End bp640212 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content66% 
IMG OID639818709 
ProductRND efflux system outer membrane lipoprotein 
Protein accessionYP_965949 
Protein GI120601549 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.16116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.32958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGTA AGACAGGCAT GAACGGTGTC GCACTCTCCG CTGCGGCACT GGCGTTGACC 
CTTTCGGTCG TTGGCGGTTG TACGCTGGCC CCGGAGTACC GGCGGCCGGC ACCTTCGATG
CCCTCTGCAT GGAATGCCGG ACAGGATGTG GCACCGGGCG CAGGTCAGGT GGCGCAGGTT
GCGGCACAGG CACCCGACGC GGCTGCACCA GCCGGGGCAT CTGGTGCCTC TGCACATTCC
GGTGCCCAGC CCGATGCCCA GCCCGGTGCG CAGCCCGCGA TGCAGACGCC GGACTGGCGG
CAGGTGGTCG TGGATGCGCC CATGGCGCGT CTCGTCGACG TGGCACTGTC CAGCAACCGC
GACCTTCGCG TGGCCGTCCT CCAGATAGAG AAGGCCCGTG CCCAGCACGC CATCGCGCGT
GCCGACCTGT TCCCGCATAT CGACGCCAGC GGTGCGGGCA ATGCGGGTCG CACGGCGCAG
TCGCTGTCTC CCACGGGCGA AGGCTATGTC TCGCATGCCT ATACGGTCGG GGTGGGGTTC
AGTGCCTATG AGCTTGACCT GTTCGGACGC GTCCGCAGCC TGAAGGAACA GGCCCTTGAG
CGGTTCCTGT CCACGGACGC CGCAGCGCGC AGCGTACAGC TGACCCTCGT GGCAGAGGTG
GGGCAGGCGT ATCTCACGCT GGTGGCTGAC CGCGAACAGC TTGCCTTGGC GCGGGAGATA
CTTGAGACGG AACAGGCTTC GTTCGAGGTG GTGCAAAGCC GTTACGGGCA CGGCATCGCC
GGTGAGCTTG ATGTGGCGCG CGCCCGCACG ACCGTGGATA CGGCGCGTGT CAATGTGGCG
GCTGCCGAAG CGAAGGTGAC TGCGGACGAG AACGCGCTGG CACTGTTGCT GGGTACGCCT
GTGACGCCCG ACATGGTGCC AGCGTGCAGG CTTGTCGATG TGGTGCCGCT GGCCGACGTG
CCCGCAGGGG TGCCTTCGGA GGTGCTCACC CGCAGGCCCG ACGTCGTGGC GGCAGAACAT
GCCCTCAAGG CGGCCAACGC CAACATCGGG GCAGCACGGG CGCAGTTCTT TCCGCGCATC
GGGCTGACGG CAAGCTATGG CAACGCCAGT AACGACATGG AGAACCTGTT CCGCGCCGGG
GCACACACGT GGAGTTTCGT GCCGCAGGTC ACGTTGCCCA TCTTCCATGC CGGGGCCATT
CGCGCCGGAG TGGAGACCGC CGAGGCGGAC AGGGACATCT ACGTGGCCCA GTACGAGAAG
GCGGTGCAGA CGGCATTCCG CGAGGTGTCG GACACTCTGG CGCAGGGCCG TTCGCTGGCG
GTGCAGACCG GCGCGCAGAC ATCTCTGGTG GAGGCGACCG CCACCAGCTA CAGCCTTGCA
TCAAAGCGTT ACGAGAGCGG AATCGCAGGC TATCTGGACA AAATCGACGC CCAACGCTCG
TATGCCGTGG CGCGGCAGAA CCTCATCGCC ATGCATCTTG CACGGCAGAA CAACCGCCTG
ACGCTGTTCA AGGCCCTTGG CGGAGGCTGG AGAGGTGAGC CCATGCCGCC TCTCGCGCCT
TCTGTACTTG AGACAGCCGG GGGGCAGGTG TCTTCGGATG CCTCTGCGGT TGCCAGTGCA
GGCGGCAGCC CTTCGAAGTA G
 
Protein sequence
MRRKTGMNGV ALSAAALALT LSVVGGCTLA PEYRRPAPSM PSAWNAGQDV APGAGQVAQV 
AAQAPDAAAP AGASGASAHS GAQPDAQPGA QPAMQTPDWR QVVVDAPMAR LVDVALSSNR
DLRVAVLQIE KARAQHAIAR ADLFPHIDAS GAGNAGRTAQ SLSPTGEGYV SHAYTVGVGF
SAYELDLFGR VRSLKEQALE RFLSTDAAAR SVQLTLVAEV GQAYLTLVAD REQLALAREI
LETEQASFEV VQSRYGHGIA GELDVARART TVDTARVNVA AAEAKVTADE NALALLLGTP
VTPDMVPACR LVDVVPLADV PAGVPSEVLT RRPDVVAAEH ALKAANANIG AARAQFFPRI
GLTASYGNAS NDMENLFRAG AHTWSFVPQV TLPIFHAGAI RAGVETAEAD RDIYVAQYEK
AVQTAFREVS DTLAQGRSLA VQTGAQTSLV EATATSYSLA SKRYESGIAG YLDKIDAQRS
YAVARQNLIA MHLARQNNRL TLFKALGGGW RGEPMPPLAP SVLETAGGQV SSDASAVASA
GGSPSK