Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0499 |
Symbol | |
ID | 4664734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 638572 |
End bp | 640212 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639818709 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_965949 |
Protein GI | 120601549 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.16116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.32958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACGTA AGACAGGCAT GAACGGTGTC GCACTCTCCG CTGCGGCACT GGCGTTGACC CTTTCGGTCG TTGGCGGTTG TACGCTGGCC CCGGAGTACC GGCGGCCGGC ACCTTCGATG CCCTCTGCAT GGAATGCCGG ACAGGATGTG GCACCGGGCG CAGGTCAGGT GGCGCAGGTT GCGGCACAGG CACCCGACGC GGCTGCACCA GCCGGGGCAT CTGGTGCCTC TGCACATTCC GGTGCCCAGC CCGATGCCCA GCCCGGTGCG CAGCCCGCGA TGCAGACGCC GGACTGGCGG CAGGTGGTCG TGGATGCGCC CATGGCGCGT CTCGTCGACG TGGCACTGTC CAGCAACCGC GACCTTCGCG TGGCCGTCCT CCAGATAGAG AAGGCCCGTG CCCAGCACGC CATCGCGCGT GCCGACCTGT TCCCGCATAT CGACGCCAGC GGTGCGGGCA ATGCGGGTCG CACGGCGCAG TCGCTGTCTC CCACGGGCGA AGGCTATGTC TCGCATGCCT ATACGGTCGG GGTGGGGTTC AGTGCCTATG AGCTTGACCT GTTCGGACGC GTCCGCAGCC TGAAGGAACA GGCCCTTGAG CGGTTCCTGT CCACGGACGC CGCAGCGCGC AGCGTACAGC TGACCCTCGT GGCAGAGGTG GGGCAGGCGT ATCTCACGCT GGTGGCTGAC CGCGAACAGC TTGCCTTGGC GCGGGAGATA CTTGAGACGG AACAGGCTTC GTTCGAGGTG GTGCAAAGCC GTTACGGGCA CGGCATCGCC GGTGAGCTTG ATGTGGCGCG CGCCCGCACG ACCGTGGATA CGGCGCGTGT CAATGTGGCG GCTGCCGAAG CGAAGGTGAC TGCGGACGAG AACGCGCTGG CACTGTTGCT GGGTACGCCT GTGACGCCCG ACATGGTGCC AGCGTGCAGG CTTGTCGATG TGGTGCCGCT GGCCGACGTG CCCGCAGGGG TGCCTTCGGA GGTGCTCACC CGCAGGCCCG ACGTCGTGGC GGCAGAACAT GCCCTCAAGG CGGCCAACGC CAACATCGGG GCAGCACGGG CGCAGTTCTT TCCGCGCATC GGGCTGACGG CAAGCTATGG CAACGCCAGT AACGACATGG AGAACCTGTT CCGCGCCGGG GCACACACGT GGAGTTTCGT GCCGCAGGTC ACGTTGCCCA TCTTCCATGC CGGGGCCATT CGCGCCGGAG TGGAGACCGC CGAGGCGGAC AGGGACATCT ACGTGGCCCA GTACGAGAAG GCGGTGCAGA CGGCATTCCG CGAGGTGTCG GACACTCTGG CGCAGGGCCG TTCGCTGGCG GTGCAGACCG GCGCGCAGAC ATCTCTGGTG GAGGCGACCG CCACCAGCTA CAGCCTTGCA TCAAAGCGTT ACGAGAGCGG AATCGCAGGC TATCTGGACA AAATCGACGC CCAACGCTCG TATGCCGTGG CGCGGCAGAA CCTCATCGCC ATGCATCTTG CACGGCAGAA CAACCGCCTG ACGCTGTTCA AGGCCCTTGG CGGAGGCTGG AGAGGTGAGC CCATGCCGCC TCTCGCGCCT TCTGTACTTG AGACAGCCGG GGGGCAGGTG TCTTCGGATG CCTCTGCGGT TGCCAGTGCA GGCGGCAGCC CTTCGAAGTA G
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Protein sequence | MRRKTGMNGV ALSAAALALT LSVVGGCTLA PEYRRPAPSM PSAWNAGQDV APGAGQVAQV AAQAPDAAAP AGASGASAHS GAQPDAQPGA QPAMQTPDWR QVVVDAPMAR LVDVALSSNR DLRVAVLQIE KARAQHAIAR ADLFPHIDAS GAGNAGRTAQ SLSPTGEGYV SHAYTVGVGF SAYELDLFGR VRSLKEQALE RFLSTDAAAR SVQLTLVAEV GQAYLTLVAD REQLALAREI LETEQASFEV VQSRYGHGIA GELDVARART TVDTARVNVA AAEAKVTADE NALALLLGTP VTPDMVPACR LVDVVPLADV PAGVPSEVLT RRPDVVAAEH ALKAANANIG AARAQFFPRI GLTASYGNAS NDMENLFRAG AHTWSFVPQV TLPIFHAGAI RAGVETAEAD RDIYVAQYEK AVQTAFREVS DTLAQGRSLA VQTGAQTSLV EATATSYSLA SKRYESGIAG YLDKIDAQRS YAVARQNLIA MHLARQNNRL TLFKALGGGW RGEPMPPLAP SVLETAGGQV SSDASAVASA GGSPSK
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