| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0489 |
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| Symbol | |
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| ID | 4664616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 622757 |
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| End bp | 624178 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639818699 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_965939 |
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| Protein GI | 120601539 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.170824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TCATTGAACA TATTGAAAGT ATTTTTGATA TTCTTAGCGA CGGCATCTAT
ATCACCCAAC GCGACGGCAC GACCCTGCTG GTCAACCGCA TGTACGAGCA GCTGACCGGC
CTCTCTTTCA AGGACCTCAG GGGGCGCAAC GTTCACGACC TCGTCGCCGA CGGCATCTTC
GACACCATCC TGAATCCTGA AGTGGTGCGA ACCAAGCGTC CGGCCGTTTC CGTGCAGCAT
GTCCGTCAGA GCAAGAAGAT CATCCTGCGA GGCTATCCCG TCTTCGATGA ACATGGCGAG
GTCTGCCTCG TGGTCACGTT CGCCCGTGAC ATCACCATGA TCACGCAATT CCGCGAACAG
ATTGCCCAGC AGAAGCAGCT CATCGAGACC TTCAGCGACC GTATCGAATG CATGCTGCAT
GAGCAGGTGC GCAACAGTCA GCCCGTCTTC GAAAGCGAAG TCATGCAGCA GGTGCTCGAC
CTCTTGCAGC GGGTGGCTGC CACGGATGCC AACATCCTCA TTCTGGGCGA GACGGGCGTG
GGCAAGGACG TGTTCGCGAG GCTAGCCCAC GAATACAGCC CGCGCAGCAG CAAGATGTTC
CTCAAGGTGG ACTGTGGCAG CATAGCCGAA AACCTCATCG AATCAGAGCT GTTCGGCTAC
GTTCCCGGTG CATTCTCCGG AGCCAGTTCC AAAGGCAAGG CGGGCTATTT CGAAATCGCC
GACGGTGGTA CCGTCTTCCT CGATGAAATC GGCGAACTGC CATTGCCCAT GCAAGCCAAG
CTGCTGCGTG TGCTGCAGGA CAGGGAGGTC ATGCGCGTAG GTTCGTCACA GGCGCGCAAG
GTGGATGTGC GCATCATCGC CGCCACAAAC CGCGACCTCG CCGAAGACGC CAAGGCGGGC
AAATTCCGCA GCGACCTCTA CTACCGCCTC AATGTCGCCG TTCTGGACCT GCCCCCCCTG
CGTGAACGGC AACAGGACAT CATCCCCCTC GTGGAGCGGT TTCTCGATCG TTTCAATGCC
AAGTACCGCC GCAACATGAC CCTGCCCAAG GGCACACGGC AGGCACTCCA GAACTACAAG
TGGCCCGGTA ACGTGCGCGA GATGCAGAAC CTCATCCAGA GCCTCGTGGT GACGTGCGAG
GGGCATTCCA TCAAGCCGGA GCACCTCCCT CCGCACATAC AGAAGGCCGC GCGCAATCGC
ACGGCATACA CGCCTCCCGC GCCCGATGAC GCCCGACCGC TGAAGGAGAT CATGGCAGAC
ATCGAGCGCG AAATCCTCGA AGAGGCCGTG CGTACGCACG GTTCGGTGTG CAAGGTGGCA
CGCATGTACA AGATCAGCCG CACCACACTC TTCCGCAAGC TGCGCGGCTC ATCGCTCGCC
GGGGTCTCGG GGGATGAGGA GCACGAGAAC ACCGAACAGT AG
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| Protein sequence | MKKIIEHIES IFDILSDGIY ITQRDGTTLL VNRMYEQLTG LSFKDLRGRN VHDLVADGIF
DTILNPEVVR TKRPAVSVQH VRQSKKIILR GYPVFDEHGE VCLVVTFARD ITMITQFREQ
IAQQKQLIET FSDRIECMLH EQVRNSQPVF ESEVMQQVLD LLQRVAATDA NILILGETGV
GKDVFARLAH EYSPRSSKMF LKVDCGSIAE NLIESELFGY VPGAFSGASS KGKAGYFEIA
DGGTVFLDEI GELPLPMQAK LLRVLQDREV MRVGSSQARK VDVRIIAATN RDLAEDAKAG
KFRSDLYYRL NVAVLDLPPL RERQQDIIPL VERFLDRFNA KYRRNMTLPK GTRQALQNYK
WPGNVREMQN LIQSLVVTCE GHSIKPEHLP PHIQKAARNR TAYTPPAPDD ARPLKEIMAD
IEREILEEAV RTHGSVCKVA RMYKISRTTL FRKLRGSSLA GVSGDEEHEN TEQ
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