Gene Dvul_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0403 
Symbol 
ID4663591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp518392 
End bp519516 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content65% 
IMG OID639818605 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_965853 
Protein GI120601453 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.150899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTTC TTCTCGTCGA CGACGAAGAG GCGTTCGTCA ACCTGTTGGC GGAACGCCTC 
GAGACACGGG GCATCACGGT GCTTGTCGCC CATGATGTGG CCTCGGCACT CGACCTGCTG
GCGGCCCATC CTGTCGATGT GGCGGTGCTG GATGTCTGCA TGCCCGGACG CGACGGTCTC
GACCTGTTGC GGGTCATGCG GGAACGCCAC CCTCTCGTGG AGGCGCTCAT GCTGACCGGC
TCGTCGGATG TCCGCAACGC CGTCGAGGGA ATGCGACTCG GGGCCTGCAA CTACCTGCTC
AAACCCGTCG ACATCGAAGA GTTGCTCCGT GAACTGCGTC TCGCCCATGA ACGCAAGATA
CGCCGCGAAG AGAGCGCCCG CATGATCGAG GCGGGCAAGC TCGCCTCGAT GGGCCGCATG
GCGGAAGGCG TGGCGCACGA GATCAACAAC CCCGTCAATA TCATCGCCAA CGCTGCGGGC
TGGATCGAAG ACCTGCTCGA AGAGCCGGAC ATCGCATCCG GCCCGCACGT GGCGGAGATG
CGCCGCACGC TCGCCAAGAT CAAACAGCAG GGCGTGCGTG TGCGCGAAAT CACCCGCAAA
CTGCTCTGCT TCGGACGCGG TCTCGACCCC CGACCGCAAC CTGTGGCCTG TGCCACGCTA
CTGCGCGAGA CACTGCAACT CGTCGCTAGC CGCTGTGAGG CCCTTGCCGT GGACGTGGTG
GTAGACCTGC CCGAAGGGCT GCCCGAGATC ATGGCCCCGC CCGTGGAATT GCGGCAGGTC
TTCCTGCATG TGATCGAGAA CGCGCTGGAT GCCATGGAAG AGAACGGCGG CACGCTCACG
GTCAGACTCA GGCTCATGCA CGGGCAGGAC GAAGAGCACG ACGCCTTGCA CGTGGCCATC
ACCGACACGG GACACGGCAT CGCACCGGCC CTGTTGCCGC GCGTCTTCGA CCCCTTCTTC
TCGACCCGCA GCGTCGGCAG GGGCATGGGC CTCGGACTTT CGGTGAGTTA CGGCGTGGTA
CGTGCCCTTG ACGGTGACAT CAACCTCACC AGCGACCCCG GACGCACGGT CTGTTCCATT
CGCCTGCCGC TGACCGCGAA ACCGCCCTGC GCCCGCGAGG CGTGA
 
Protein sequence
MRVLLVDDEE AFVNLLAERL ETRGITVLVA HDVASALDLL AAHPVDVAVL DVCMPGRDGL 
DLLRVMRERH PLVEALMLTG SSDVRNAVEG MRLGACNYLL KPVDIEELLR ELRLAHERKI
RREESARMIE AGKLASMGRM AEGVAHEINN PVNIIANAAG WIEDLLEEPD IASGPHVAEM
RRTLAKIKQQ GVRVREITRK LLCFGRGLDP RPQPVACATL LRETLQLVAS RCEALAVDVV
VDLPEGLPEI MAPPVELRQV FLHVIENALD AMEENGGTLT VRLRLMHGQD EEHDALHVAI
TDTGHGIAPA LLPRVFDPFF STRSVGRGMG LGLSVSYGVV RALDGDINLT SDPGRTVCSI
RLPLTAKPPC AREA