Gene Dvul_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0312 
Symbol 
ID4663638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp390053 
End bp391705 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content63% 
IMG OID639818513 
ProductAMP-binding domain protein 
Protein accessionYP_965762 
Protein GI120601362 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGT TCGCCATACG CGAGATGACA CTCGGCCGCA TACTGGATGA GACCGCCGCG 
AAGTTTCCCG ATAACGACGC CGTGGTCTAT GTCGACCGCG ACTACCGGCA GACCTACCGC
GAGTTCGTCT CGGTGGTGGA CGACCTCGCG CGCGGGCTCA TGGCCCTTGG CGTGAAGCGG
GGCGACAAGG TGGCGCTATG GGCCACCAAC GTGCCGTACT GGGTGGCGCT TCAGTTCGCC
ACGGCGAAAA TCGGCGCGGT GCTGCTCACG GTCAACACCA ACTATCGCGA GAGTGAACTG
CGCTACCTGC TCGAGCAGTC CGAGTGCGAG AACCTGTTCA TCATGGACGG CTTCCGCGAC
CACGACTTCG TGCAGACCAT CTATCAGGTC ATTCCCGAAC TCAGGATGCA GCCCCGCGGC
CAGTTGCGCT GCGAGGGGCT GCCGCACCTC AAGCGCGTGA TGTTCCTCGG TGCGGAGAAG
CACCGGGGCA TGTACTCCGT GCCCGAGATC GTCAGCCTTG GCGTCATGGT CTCCGATGAG
GAGTTCCGCC AGCGGCAGGA TGAGCTCGAC CCCTACGACG TGGTGAACAT GCAGTACACC
TCGGGCACGA CGGGCTTTCC CAAGGGCGTG ATGCTCACCC ATGTGGGCAT CGGCAACAAC
GGTTACTGGA TAGGCCGCAA TCAGGGCTTC ACCGAAAAGG ACAGGGTCTG CCTGCCCGTG
CCGCTGTTCC ACTGCTTCGG GTGTGTTCTG GGTGTCATGG CCGCCATCAA CCACGGTGCC
GCGCTGGTCA TCCTTGAGAA CTTCAACCCC ATGCATGTCA TGGCGTCGGT CGACCAGGAG
AAGTGCACCG CCCTGTACGG CGTGCCGACC ATGTTCCTTG CCGTGCTGGA GCACAAGCTC
TTCGACCGCT TCGACTTCAG TTCGCTGCGC ACGGGCATCA TGGCGGGTTC GGTCTGCCCC
GAACCGCTCA TGCGCCGGGT CATCGAGAAG ATGAACATGC GTGAAATCAC CATCTGCTAC
GGCCTTACCG AGGGGTCGCC CGTCATGACC CAGACGCTGG TGGACGATTC ACTCGAACGG
CGTGTGCAGA CCGTGGGGCG CGCCATGCCC GGCATCGAGG TGCGCATCGT CGACCCCGAG
ACCAACGAGG AGGTGCCGCA TGGTACCCCC GGAGAGGTGG TCTGCCGCGG CTACAACGTG
ATGAAGGGCT ACTACAACAT GCCCGAGGCC ACGGCCAAGG CCGTGGACGG CGACGGGTGG
CTTCATTCGG GCGACCTCGG CATCATGGAC GAGCATGGCT ACGTGCGCAT CACAGGGCGC
ATCAAGGACA TGATCATCCG TGGCGGCGAG AACATCTACC CACGGGAAAT CGAAGAGTTC
CTCTATGGCA TGGAGGGCGT TCAGGACGTA CAGGTGGTCG GCGTGCCCAG CCGCAAGTAC
GGCGAGGAGG TGGGAGCGTT CATCATCCCC AAGGAGGGGT ACGACCTCGC CCCCGAGGAT
GTCCGTGACC ACTGCCGCGG GCGCATCTCG TGGTACAAGG TGCCTCGCCA CATCGCGTTC
GTCTCCGAAT TCCCCATGAC CGCCAGCGCC AAGATACAGA AGTACAAGCT GCGCGAGATG
GCTGCGGAGT TGTTCCCCGA CGCCATGAAG TAG
 
Protein sequence
MDTFAIREMT LGRILDETAA KFPDNDAVVY VDRDYRQTYR EFVSVVDDLA RGLMALGVKR 
GDKVALWATN VPYWVALQFA TAKIGAVLLT VNTNYRESEL RYLLEQSECE NLFIMDGFRD
HDFVQTIYQV IPELRMQPRG QLRCEGLPHL KRVMFLGAEK HRGMYSVPEI VSLGVMVSDE
EFRQRQDELD PYDVVNMQYT SGTTGFPKGV MLTHVGIGNN GYWIGRNQGF TEKDRVCLPV
PLFHCFGCVL GVMAAINHGA ALVILENFNP MHVMASVDQE KCTALYGVPT MFLAVLEHKL
FDRFDFSSLR TGIMAGSVCP EPLMRRVIEK MNMREITICY GLTEGSPVMT QTLVDDSLER
RVQTVGRAMP GIEVRIVDPE TNEEVPHGTP GEVVCRGYNV MKGYYNMPEA TAKAVDGDGW
LHSGDLGIMD EHGYVRITGR IKDMIIRGGE NIYPREIEEF LYGMEGVQDV QVVGVPSRKY
GEEVGAFIIP KEGYDLAPED VRDHCRGRIS WYKVPRHIAF VSEFPMTASA KIQKYKLREM
AAELFPDAMK