| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0309 |
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| Symbol | |
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| ID | 4663894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 384142 |
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| End bp | 386625 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639818510 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_965759 |
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| Protein GI | 120601359 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0510078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACGT TCGCCATTCC GGCACCGCTC ATCGACGCCT GGCGCACCAC ACTGGAGACG
TTGCGAAACC TGACCGGTCT CGACTTCGGT CTGCTCACGC GCGAAAACGG CGGTGAACTC
GAAATCATGG TCACGGCAGG TGAACTGCCC TCGCCTTTCT CCGAAGGATA TTGCCTGAAG
GGCGGCCCGG AAGGACCATT GTGCGCCGTG GTGCACACCC TGGCGCGGTC GCTTCTCATC
CCCGACACGA CCGCCGATGC CCGATGGGCC TCGAACCCTG CGGTGAAGGC AGGCGTACGT
GCCTATTTCG GCCTGCCGCT TCGTCTTCCG ACCGGCGCAC TCTTCGGCAC GCTCTGTCTC
GGTTCCATGT CCCCGGTCAC AGGACACGAC GCGGTGCTCA AGCCTCTCCA CTGCTTTGCC
ACCCTCGTGG AACAGCACAT AGCCCTTCTT TCCACCAACG CACTCCTGCG GTCACAGCTG
GACGCCCTGC CGGGTGCCAG CTTCGCCAGC GACCCCCACG GGCAGATGCT CTTCGCCAGC
AACCGCTGCG GCAGCCTGCT CGACCTGCAT CCGGCAGATA TCCCCGGAAG CGACGTCGAT
ACGGTCTTCA ACCGCATCGC CGCACTCTGC GAATCCCCCG AAGAATGCCA CGCCATCCTC
CGCCGGTCGT TCACTCTCGG CGGCCCAAGC AACGGCAAAC TCGCCTTCGA TGACGGACGG
ACCATACGCT GGCAGGCCCG CAGACTGCGC GAGGACGCGG GGTCGGTACT CGGGTGCACA
TGGTTTCTGG AGGATGCCAC AGCAGAATTG CAGGCACGCG CGGGGCTCAC CCGAAGCGAG
GCCCTGTTCC GCGGGCTTTT CAATAACGCC GCCGTCGGCA TCGTCCTGCT GGACAGGCAG
GGTTTCGTAG TCCGCAGCAA TGTGGCCTGT GCCCGGATGC TGGGCACCTC GCCCGAACAG
ATGCACGGCC TTTCGTTTCG TGCGGTGCTT CCCCCCGAAG ATGCCGACCA GCATCTCGAG
GAGATGCAGT CCCTCGCCGA AGGAGAGACG GACGAACTGC ACGGTTGCTG GGAGATGCTG
CACAGGAACG GCTCACGCCT GCGCGTCGAC CTGCATGGCG CACGCCTGCC GGGTAGTGGC
GAAGAGGTCG TCATGCTCGT CGGCGTCGAT GTGACAGAGC AATGGCGCAC CGAACGCGCC
CTTGCCGAAA GCGAACGCCG TTACCGCGCC CTCTTCGACA ACGCGCAAGC CGGCATATTC
CGCACCAGTC TCGCCGACGG CACGTTCCTC GAAGCCAACC TGCGCATGGC GCAGATGTTC
GGCTACGACG ATGTCGCCAC CTTCATGGCG GAATACCGGG CCGCAGAGAA TTACGTCGAC
CCCGCAGACA GGGCTCTGAT GCTCGACAGG CTGCGCACCT CCGGCAGTTT CGCCACCATG
GAGACCCACA TGCGCCGCCG CGACGGGACA ACCACATGGT TTCTCTACTC CGGCACACTG
GATGGCGACA CCATCATCGG CGTGGCCAAC GAAATCAGTG AGATGCGAGC CACGCAAGAA
GCATTGCGCC GTTCAGAGGA GCGCTACCGC GCCCTCTTCG ACAACGCGGC AGACGGTCTT
CTGCTCTATG AGGCCGACGG AACCCTCATC GACGTCAACG AGACCATCGC CCGCAGGCTG
GGAGAATCAC GCGAGGCCAT CGTGGGCCGG AACGTCGCCT CCATCGTCGA ACCCGAAGTA
CTTGAGCGGG TGCGCCCGCG CCTCACCGAG ATACTGGAAA CCGGGCACGC CAGCTTCGAG
TCGGTGCATC GCACCGCCAT GGGCCCCGTC AATGTGGAAG TGCATGCCCG CCGTATCGAA
TTCGAGGGGC GCTTCGTGGT GCTGAGTTCA GCCCGCGACA TCACCGAACG CAAGAACCTC
GAAGCCGCCC TGCTGCGTGA AGCGACCACC GACCCCCTTA CGGGGGTCCG CAACAGGCGT
CAGTTCTTCG TCGACGCCAA CCGTGAATTC GCGCGTGCAC TGCGCCATGA CTCCGGTCTG
GCGGTGCTCA TGCTCGATAT CGACCATTTC AAGAACGTCA ACGACCTTTA CGGGCATCAG
GCCGGGGATG AAGTGCTTCG GGCCTTTGCC GCCTGCTGTG TCGAAGCCCT GCGGGCCTAT
GACGTCTTCG GCAGGTTGGG CGGCGAGGAA TTCGCGGCCC TGCTGCCAGC CGCTTCACCC
GAAGAGGCCA TGGAGACGGC TGAACGGCTG CGCAAGCGGG TGGAACGCAG GTCTGTGGTC
TATGAGGGAA CAGCGCTGCA ATGCACCGTC AGCGTTGGGG TGACCAGCCT TGCCGCGGCA
GACCTCGGCT TCGACGACAT GCTGCGCCGC GCGGACAGGG CCCTTTACGC CGCCAAGGAC
CATGGCAGAA ACCGTAGCGA GATGGCCCCC ATGCCCATGG TTCCCGCAGA GATTCCACCG
CCCAGAAAAC CTTTCCGCGA GTGA
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| Protein sequence | MNTFAIPAPL IDAWRTTLET LRNLTGLDFG LLTRENGGEL EIMVTAGELP SPFSEGYCLK
GGPEGPLCAV VHTLARSLLI PDTTADARWA SNPAVKAGVR AYFGLPLRLP TGALFGTLCL
GSMSPVTGHD AVLKPLHCFA TLVEQHIALL STNALLRSQL DALPGASFAS DPHGQMLFAS
NRCGSLLDLH PADIPGSDVD TVFNRIAALC ESPEECHAIL RRSFTLGGPS NGKLAFDDGR
TIRWQARRLR EDAGSVLGCT WFLEDATAEL QARAGLTRSE ALFRGLFNNA AVGIVLLDRQ
GFVVRSNVAC ARMLGTSPEQ MHGLSFRAVL PPEDADQHLE EMQSLAEGET DELHGCWEML
HRNGSRLRVD LHGARLPGSG EEVVMLVGVD VTEQWRTERA LAESERRYRA LFDNAQAGIF
RTSLADGTFL EANLRMAQMF GYDDVATFMA EYRAAENYVD PADRALMLDR LRTSGSFATM
ETHMRRRDGT TTWFLYSGTL DGDTIIGVAN EISEMRATQE ALRRSEERYR ALFDNAADGL
LLYEADGTLI DVNETIARRL GESREAIVGR NVASIVEPEV LERVRPRLTE ILETGHASFE
SVHRTAMGPV NVEVHARRIE FEGRFVVLSS ARDITERKNL EAALLREATT DPLTGVRNRR
QFFVDANREF ARALRHDSGL AVLMLDIDHF KNVNDLYGHQ AGDEVLRAFA ACCVEALRAY
DVFGRLGGEE FAALLPAASP EEAMETAERL RKRVERRSVV YEGTALQCTV SVGVTSLAAA
DLGFDDMLRR ADRALYAAKD HGRNRSEMAP MPMVPAEIPP PRKPFRE
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