Gene Dvul_0282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0282 
Symbol 
ID4664050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp351840 
End bp352532 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content66% 
IMG OID639818483 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_965732 
Protein GI120601332 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.235807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000672493 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGAACA ATTTCTTCCA GATCATCGGC CAGGCCACAC TGGTGGCCAA GTTCGTGCTG 
GCGCTGCTGG TGCTCATGTC GATAGGCAGC TGGTCGCTCA TGTTCCAGAA GCTGTTCGCG
CTCCGGGCGG CCCGCCGCAA GGCGGAGGAC GGGCTGGAGC GCTTCCTGCG GGCACGCGAC
CTGCGCGAGG CCGTGCAGTC CCTCGGCGGT GACGCCACGT CGCCCCTGTA CCATGTGGCA
CAGCAGGGTG TCGCCGAGTT CAACCGCCTC AAGGAGATGG GCAACTCGGG CGAGGTCGTG
GCCGACAACG TGCGCCGTGC CCTGCGACAG GGCGTGGCCA ACGAGATGAG CAGCCTGTCG
TCATCGCTCT CCTTCCTCGC CACTGCGGCC AACACCGCAC CGTTCATCGG CCTCTTCGGC
ACGGTATGGG GCATCATGCA CTCGTTCCAT GCCATCGGCA TGATGAAGAG CGCCTCTCTG
GCCACTGTCG CACCGGGCAT CTCCGAAGCC CTCATCGCCA CAGCCATCGG CCTTGCCGTG
GCCATTCCCG CCACCGTCGG CTACAACGTG TTCCTCGGCA TGCTGGCGGG CATCGAAGTG
CAGGTGGTCA ACTTCGCGGG TGTGTTCCTG AACCGCGTAC AGCGTGAGTT GAACGCCCAC
CGCGGGGCCC GTGCAGCTCA CGGCGAGCAC TAG
 
Protein sequence
MENNFFQIIG QATLVAKFVL ALLVLMSIGS WSLMFQKLFA LRAARRKAED GLERFLRARD 
LREAVQSLGG DATSPLYHVA QQGVAEFNRL KEMGNSGEVV ADNVRRALRQ GVANEMSSLS
SSLSFLATAA NTAPFIGLFG TVWGIMHSFH AIGMMKSASL ATVAPGISEA LIATAIGLAV
AIPATVGYNV FLGMLAGIEV QVVNFAGVFL NRVQRELNAH RGARAAHGEH