Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0266 |
Symbol | prfC |
ID | 4663539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 326177 |
End bp | 327766 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639818463 |
Product | peptide chain release factor 3 |
Protein accession | YP_965717 |
Protein GI | 120601317 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG4108] Peptide chain release factor RF-3 |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.580519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACCA GACTCGAACG TGAAGTGGCG CGCAGGCGCA CCTTCGCCAT CATCAGCCAC CCCGACGCAG GCAAGACAAC CCTCACCGAA AAGCTGCTGC TCTTCGGCGG GGCCATCCAG ATGGCTGGCG CGGTCAAGGC CCGCAAGTCG GGTCGTCACG CCACGTCGGA CTGGATGGCC ATGGAACGCG AACGCGGCAT CTCGGTGACC ACTTCCGTGA TGCAGTTCCC CTACGGCGAC CACATGGTCA ACCTGCTCGA CACGCCGGGC CACCAGGACT TCTCCGAAGA CACCTACCGC GTGCTCACCG CCGTGGACTC GGCACTGGTG GTCATCGACG TCGCCAAGGG GGTCGAGGCA CAGACCCGCA AGCTCATGGA CGTATGCCGC CTGCGCGACA CCCCGGTCAT GACCTTCATC AACAAACTCG ACCGCGACGG TCTGCCGCCG CTCGATGTCA TGGCCGACAT CGAAGAGAAC CTGCGCATCG AATGCGTGCC GCTCACGTGG CCCATCGGCA TGGGGTCCGA CTTCAAGGGC ACCTACAACC TGCTCAAGCG CGAACTCCAT CTCTTCTCGG CCAGCCACCA CGGGCGCATT CAGGAAGGCA TCCTCATCCG CGACCTTGAC GACCCGCTGC TCGACGAACA TCTCGGGCCG CAGGCCGACG CCCTGCGCAT GGACCTTGCC CTGCTCGAAG AGGCGGGCAC GCCGTTCTCA CGCGAGAAGT ACCTCCGGGG CGAGCAGACC CCCGTCTTCT TCGGTTCCGC CATCAACAAC TTCGGCGTGC GTGAACTGCT CGACAACTTC GTCGACCTCG CCCCCGCCCC TCGGCCTCGC CCGGCCATCA CGCGCGAGGT GTCTCCGCAT GAGGAGAGCT TCACCGGCGT CGTGTTCAAG ATTCAGGCGA ACATGGACAA GGCCCACCGC GACCGCATGG CCTTCATGCG CATCTGCTCA GGCACGTTCA CCCGCGGCAT GAAGCTGCGC CATCACCGTG TGGGCAAGGA CGTGACCGTG GCCAATGCCA CCATATTCCT CGCGCAGGAC AGGTCGGGCG TCGAAGAGGC CTTCCCCGGC GACATCATCG GCATCCCCAA CCACGGCACC ATCAAGATAG GCGACACCTT CACCGAATCG AAGGAAGAGC TGAAGTTCAC CGGCATCCCC AGCTTCTCGC CGGAACATTT CCGCCGGGTG CGGCTGCGCA ATCCGCTCAA GGCCAAGCAG TTGCAGAAGG GCCTGGAGCA ATTGGCGGAA GAGGGCGCGG TGCAGCTTTT CAGGCCGCAG GTCAACAACG ACTACATCCT CGGTGCCGTG GGCGTATTGC AGTTCGACGT CATCATCTCG CGCCTGCATG ACGAATACTC CGTCGAGGCG GCCTACGAAC CGTGCTCCAT CCACACCGCC CGGTGGCTGC ACTGCAACGA CCGCAAGGTG TTCGCCGAAT TCTGCGACTA CTATTCCGCC GAACTCGCCA TAGACGCCGA GGGAGCACTG GCCTATCTCG CCCCCAACCC GTGGCGGCTC GAATCGGCCA TGGAACGCTA TCCCGCCGTG GAATTCCGGA CCACCCGCGA GATACGCTAG
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Protein sequence | MSTRLEREVA RRRTFAIISH PDAGKTTLTE KLLLFGGAIQ MAGAVKARKS GRHATSDWMA MERERGISVT TSVMQFPYGD HMVNLLDTPG HQDFSEDTYR VLTAVDSALV VIDVAKGVEA QTRKLMDVCR LRDTPVMTFI NKLDRDGLPP LDVMADIEEN LRIECVPLTW PIGMGSDFKG TYNLLKRELH LFSASHHGRI QEGILIRDLD DPLLDEHLGP QADALRMDLA LLEEAGTPFS REKYLRGEQT PVFFGSAINN FGVRELLDNF VDLAPAPRPR PAITREVSPH EESFTGVVFK IQANMDKAHR DRMAFMRICS GTFTRGMKLR HHRVGKDVTV ANATIFLAQD RSGVEEAFPG DIIGIPNHGT IKIGDTFTES KEELKFTGIP SFSPEHFRRV RLRNPLKAKQ LQKGLEQLAE EGAVQLFRPQ VNNDYILGAV GVLQFDVIIS RLHDEYSVEA AYEPCSIHTA RWLHCNDRKV FAEFCDYYSA ELAIDAEGAL AYLAPNPWRL ESAMERYPAV EFRTTREIR
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