Gene Dvul_0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0165 
Symbol 
ID4662899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp198407 
End bp199579 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content66% 
IMG OID639818361 
Productaminotransferase, class I and II 
Protein accessionYP_965616 
Protein GI120601216 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCT CGGATCGTCT TACCCGCATC AAACCTTCCG CCACGCTCGC CGTCAACGCC 
AAGGCGCTCG AACTCAAGGC CCGTGGGGTG AAGGTCGTCA GCCTCGCCGT GGGCGAGCCT
GATTTCGGCA CACCCGCGCA CATCTGCGAG GCGGCCAAGA GAGCCATCGA CGAGGGTTTC
ACCCGCTACA CCCCCGTGCC CGGCATCATT GAACTGCGCG AGGCCGTGGC GGGCTACTTC
GGTCGCTGCT ACGGGGTCGA AGCCCCCGCC GAGGCCACCA TCGTGACCAA CGGCGGCAAG
CAGGCACTGT ACAACCTCTT TCAGGCACTG CTCAACCCCG GCGACGAGGT GCTCGTGCCC
GCGCCCTACT GGGTGAGCTA TCCTGCGCTG GTGCAGCTTG CCGAGGGCGT GCCCGTGTTC
GTGCCCTCGC CCGCCGAACG CGGCTTCAAG ATAACCCCCG CCGAACTCGA CGCGCACCGC
ACCCCCAGAA CACGGGTGCT GCTGCTCAAT TCGCCCTCCA ACCCCACGGG TGCGTGCTAT
ACCCGCGAGG AGATGGACGC CCTCATGCAG TGGGCCGTCG ACCATGACAT CTTCGTCATC
GCCGACGAGA TATACGACCG CCTCGTCTAC GGCGACATGC AGCCCGTGAG CGTCTCCGGC
TGGTGGCAGC GTTTCCCCGA CAAGGTGGCG GTGGTCAACG GCCTCGCCAA GACCTTTGCC
ATGACCGGCT GGCGCGTGGG CTATGTGCTT GCCCACCCCG ACCTCGTGAA GGCCGTGGCC
AAGATTCAGG GACAGTCCAC GTCCAACATA TGCTCCATCG CCCAGAAAGC CGCCCTCGCC
GCCCTGACCG GTCCCTACGA TGCCGTGGAG GAGATGCGGT GCGCCTTCGT GCGCCGTCGC
GACCTCGCCT ATGACATCAT CTCAGGCTGG AAGGACGTGG TGTGCCCGCG CCCCGACGGT
GCGTTCTACC TCTTCGCCGA CATCCACCGG CACTACACCG CGTCCATGCC CGATTCCGCC
GCCGTCTGCA CTCGTCTTCT CGAAGAGGCG CAGGTGGCAC TGGTGCCCGG TTCCGCCTTC
GGCGACGACA AGTGCATCCG GTTCTCGTAC GCCGTGGCGG ACGATGTGCT CGAAGATGCG
CTTTCGTGCG TCGCCAAGGT ACTGTTCGGC TAG
 
Protein sequence
MNISDRLTRI KPSATLAVNA KALELKARGV KVVSLAVGEP DFGTPAHICE AAKRAIDEGF 
TRYTPVPGII ELREAVAGYF GRCYGVEAPA EATIVTNGGK QALYNLFQAL LNPGDEVLVP
APYWVSYPAL VQLAEGVPVF VPSPAERGFK ITPAELDAHR TPRTRVLLLN SPSNPTGACY
TREEMDALMQ WAVDHDIFVI ADEIYDRLVY GDMQPVSVSG WWQRFPDKVA VVNGLAKTFA
MTGWRVGYVL AHPDLVKAVA KIQGQSTSNI CSIAQKAALA ALTGPYDAVE EMRCAFVRRR
DLAYDIISGW KDVVCPRPDG AFYLFADIHR HYTASMPDSA AVCTRLLEEA QVALVPGSAF
GDDKCIRFSY AVADDVLEDA LSCVAKVLFG