Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0159 |
Symbol | |
ID | 4662786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 194649 |
End bp | 195446 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639818355 |
Product | FliA/WhiG family RNA polymerase sigma factor |
Protein accession | YP_965610 |
Protein GI | 120601210 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAACAT CAAGTTCTTC TGGAAAAAGC TGCTCTTCCG CAGCTAGCCC TTGGGAGGCG CTTGAGGCCG GAACGACGGC ATGGCCCGAC TTCGCCCCGG CGGAGAAGGA GGCCATCGTC CGTCATTACG CGCCCAAGAT ACGCTTCCTC GCCTTGCGCC TGAAGGCCAA GCTGCCGCGC AACGTTGAGC TTGGCGAACT CATCAGCGCG GGCACGCTGG GTCTCATGGA GGCGCTTGGC AAGTTCAAGC CGCAACTGGG CATCCGCTTC GAGACCTACG CCGAAAGCCG TATCCGCGGG GCCATGCTCG ACGAGTTGCG AAGGCTCGAC TGGTTTCCGC GAAGTCTGCG GCAACGGGTG CGCCAGCTTG ACGAGGCCAT GCAGCGCATC GAGCACGAGA CGGGGCGGCG CGCCACTGAA GAAGACTTGC AGAAGGCCAC GGGGCTGGAC GAAAAGGACG TACGACTGGG GCTTGAGGCG TTGCAGAACC AGCTGTGCCT TTCGCTGGAG GCCATGCAGG ATTCGCTGGC GGGTGAAGGC GGCCCGCAGT CGGACGCCGA CCCCATGCAG ACCGCAGCCA CGCAAGAGCT CATCGAGCGC GTGGCCTCTC TCATCGACGA ATTGACACCA AGAGAGAAGT TGGTATTGTC ATTATATTAC AGTGATGAAC TGAACATGCG CGAAACCGCA GAAGTCATGG GCATCACCGA GGGGCGGGTC TCGCAGTTGC ACTCACAGGC GCTGGGTAGG CTGCGTCGCG AATTCCGCAA CCATTACGGC GAGCACGACG CCGTCTAG
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Protein sequence | MVTSSSSGKS CSSAASPWEA LEAGTTAWPD FAPAEKEAIV RHYAPKIRFL ALRLKAKLPR NVELGELISA GTLGLMEALG KFKPQLGIRF ETYAESRIRG AMLDELRRLD WFPRSLRQRV RQLDEAMQRI EHETGRRATE EDLQKATGLD EKDVRLGLEA LQNQLCLSLE AMQDSLAGEG GPQSDADPMQ TAATQELIER VASLIDELTP REKLVLSLYY SDELNMRETA EVMGITEGRV SQLHSQALGR LRREFRNHYG EHDAV
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