| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0099 |
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| Symbol | |
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| ID | 4664282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 118322 |
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| End bp | 118969 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639818293 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_965550 |
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| Protein GI | 120601150 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00987252 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.4517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCTGTAC GATTGAGGGA ACCCGTCAAT GGACTGACCC ACTGTCTTGG CGCTGTCCTT
GCGCTGGTGG GGGCCGTGCT GTTGCTTGCC CGCGTGGCGT CGCCCGCCAT GCCGTGGCAC
ATCGTCACCT TCGCGGTCTT CGGCACCGCC ATGGTCATGC TCTACACGGC GAGTACGCTC
TACCACTGGT TGCCGCTTTC CGAGGCGGGC GTGCGGCTGT GGCGGCGCAT CGACCATTGC
ATGATCTTCG TCTACATCGC GGCGACCTAT ACGCCCATAT GCCTCATCCC GTTACGCGGG
CCGTGGGGCT GGTCGCTCTT CGGCAGCGTA TGGGCGCTGG CGCTGGCTGG CATCTTCGTG
AAGGTGTTCT GGCTGCATGC GCCGCGCTGG CTGTCGACGG GGTTGTACCT CGGCATGGGG
TGGATGGTCA TCGTCGGCGT GTACCCGCTG GTGGTGAGCC TGCCCGCCGG GGCGCTGTGG
TGGCTGCTGG CGGGAGGCCT GTTCTACACC GTGGGTGCCG TGGTCTATGC CAGCCGCTGG
CCCAATGTGG CACGGCATTT CGGCTTTCAT GAGCTGTTCC ACGTGTTCGT CATGGCCGGA
AGCTTCTGCC ATTTTCTCGT GATGTACCTG TACGTGAGCA GGCTGTAG
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| Protein sequence | MAVRLREPVN GLTHCLGAVL ALVGAVLLLA RVASPAMPWH IVTFAVFGTA MVMLYTASTL
YHWLPLSEAG VRLWRRIDHC MIFVYIAATY TPICLIPLRG PWGWSLFGSV WALALAGIFV
KVFWLHAPRW LSTGLYLGMG WMVIVGVYPL VVSLPAGALW WLLAGGLFYT VGAVVYASRW
PNVARHFGFH ELFHVFVMAG SFCHFLVMYL YVSRL
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