| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3170 |
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| Symbol | |
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| ID | 7175116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3995779 |
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| End bp | 3998589 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643541706 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_002437574 |
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| Protein GI | 218888253 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
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| TIGRFAM ID | [TIGR00003] copper ion binding protein
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.158229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC CCGAAGAATT GCCCGGTGTT CCGCAACAGT CTGCCCCTGC CTCCGGCACC
CCTCCCGTCC CGGAAGGGGC CGCCGCCCCC GACCTGTCCC GGCAGATCCT GCCGGTGCGC
GGCATGACCT GCGCGGTGTG CGCAGGCCGC ATAGAGCGCA TGGTGGGGCA GATGGACGGC
GTGTCGCGCA TCAGCGTGAA CCTGGCCACC GAGACCATGG ACGTGGCGTG GAACCCCGCC
GCCCTGCATC TGGACGACAT TGCAGAGCGG GTGAAGGATC TGGGCTTCGA GGCCGTGCTG
CCGGACCCCG CATCCACCGC CGGGCAGGAT GACGGCCTGT TGCGCTACGC CGTGCGCGGC
ATGCACTGCG CGGCATGCTC CGCACGCATC GAGCGCGCCG TGGGCCAGCT GGAGGGCGTG
GCCGCCGTCA CAGTCAGCCT GGCCACGGAA ACGGCGCAGG TCACCCCTGC TCCCGGCCTT
GGCCCGGACG CGACGGATGC CCTTGCCGCC GCCATTCCCG CGCGCATCGC GGACCTTGGC
TTTTCGGCGG AACGCATCCT GCCCCGGCAG GATTCCGGCA CCGCCCTGTG GGAAGCCCAG
CGCGAGGAAG CCGCCGCCCG TCTGGCCCGC ATGCGCGGCA AGCTGGCACG CGAATTCGCC
TTCACCATTC CGCTGCTGGT GCTGTCCATG GGCCACATGG CGGGCCTGCC CCTGCCCGCC
TCGCTCGACC CGCACCACGC GCCGCTTGCA TTCGCGCTGG CGCAACTGCT GCTGACGCTG
CCGGTGATGT GGTTCGGGCG CGATTTCTAC CGCATCGGCT TCGGCAACCT GGCGCGCCGC
GCCCCCAACA TGGATTCGCT GGTGGCCGTG GGCACCGGCG CGGCCTTTGC CTACAGCCTG
TGGAACACCG TGGAGATCGG TCTTGGGGTG GAGGTGGCCC GGCGGGTCAT GGACCTGTAC
TACGAGTCGG CGGCGGTGCT CATCGCGCTG GTGTCGTTGG GCAAGTACTT CGAACTGCGC
TCGCGCACCC GCACGTCAGA GGCCATCAAG GCCCTGATGG AACTTGCGCC GGACACCGCC
CTGCGCATGG AGGGCGGCGA GGCGCGCGAG GTGCCCGTGG CGTCCGTAAG GGTCGGTGAC
CGGCTGCTGG TGCGGCCCGG TGCGCGCATT GCCGTGGACG GCGTGGTGGA GGACGGCACC
AGCAGCGTGG ACGAGGCCAT GCTGACCGGA GAAAGCCTGC CCGTGACCAA GAACCCCGGC
GACCCGGTGG CGGGCGGCAC CATCAACCGG CACGGCTCGT TCGTCATGCG GGCGGAGCGG
GTGGGCGCGG ACACCGTGCT GGCCCGGATC ATCCGGCTGG TGCAGGACGC CCAGGGGTCG
AAGGCCCCCA TCGCCAACCT GGCCGACCGG GTGAGCCTGT GGTTCGTCCC GGCGGTGATG
GCGCTGGCGG TGCTGGCTGG CGTGGCGTGG TATGCCGCCG GTGCGGAATT CGCCTTTGCC
CTGCGCATCT TCGTGGCGGT GATGGTCATT GCCTGCCCCT GCGCCATGGG CCTTGCCACG
CCCACGTCCA TCATGGTGGG AACCGGGCGC GGCGCGCAAC TGGGCGTGCT GATCAAGAGC
GGCGAGGCGC TGGAACAGGC CGGGCGGCTC ACCGCGCTGG TGTTCGACAA GACCGGCACG
CTCACCGTGG GCAGCCCGCG CCTGACTGAC GTGGTTCTCC TGACTGACGT GGTTCCCCTG
ACGGATGTGG CGGCCCTGAC GGATGCCGCA ACGGCGGGCG CGGCAGGGGA GGCCGCACCG
GCCCACGGCG ATGCACACTT TGATGAATCG GCACTGGTGC GCCTGGCCGC CTCGCTGGAA
GCCCTGTCGG AACACCCCCT GGCCGAGGCC GTGGCGGCAG GAGCCACGGA ACGCGGCCTT
GCCCCGTGGC CGGTGCAGGA CTTTCTGGCC GTGCCGGGCA AGGGCGTGCG CGGCAGTGTC
GTGACCGATG ATGGTGCGCA GCGTGCCGTC GCCATTGGCA ACGTGGCCTT CATGGCGGCA
GAGAACGTGG CCGGGCACGA TGCCCCTCAT GTGACCGCCC GCGCCGATGC GCTGGCCGAG
CAGGGCCGCA CCCCGCTGTA CATGGCCGTG GATGGCCGCA TGGCCGCCCT GCTGGGCGTG
GCCGACCCGC TGAAGCCGGA GGCCCCGGCT GTGGTGCGCC GCCTGCGGGA CATGGGCGTG
CGCGTGGTGA TGCTGACCGG CGACAACCGC CGCACCGCCC TGGCCGTGGC CCGGCAGGCG
GGCATCGACG ACGTGCGGGC CGAAGTGCTG CCCGACCAGA AGGAACAGGC CGTCAGCGCG
TTGCAGGCCG AAGGCCACGT GGTGGGCATG GTGGGCGACG GCATCAACGA TGCCCCGGCC
CTGGCCCGCG CCCACGTGGG CATCGCCATG GGCACCGGCA TCGACGTGGC GGTGGAGGCG
GGCGACATAG TGCTGCTACG CGGCGGGCTG GACGGGGTGC TCACGGCCCT TGCCCTCAGC
CGGGCCACGG TGCGCAACAT CCGCCAGAAC CTGTTCTGGG CCTTCGGCTA CAACGTGTTG
GGCATTCCCG TGGCGGCGGG GCTGCTGCAT GCCTTTGGCG GGCCCACCCT GTCGCCCATG
ATCGCGGGCG GGGCCATGGC CCTTTCGTCG GTTTCCGTGG TCAGCAATGC GTTGCGGCTG
CGCTTTTTCA CGCCGGATGA CGGGTCGGCA GATGGACCTG AGACCAACCC GGAGACCAGT
CCGGCGGCCA GCCCTGAGAC CAGTCCGGAG GGCGCGGGCA AGAACGCATA G
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| Protein sequence | MTTPEELPGV PQQSAPASGT PPVPEGAAAP DLSRQILPVR GMTCAVCAGR IERMVGQMDG
VSRISVNLAT ETMDVAWNPA ALHLDDIAER VKDLGFEAVL PDPASTAGQD DGLLRYAVRG
MHCAACSARI ERAVGQLEGV AAVTVSLATE TAQVTPAPGL GPDATDALAA AIPARIADLG
FSAERILPRQ DSGTALWEAQ REEAAARLAR MRGKLAREFA FTIPLLVLSM GHMAGLPLPA
SLDPHHAPLA FALAQLLLTL PVMWFGRDFY RIGFGNLARR APNMDSLVAV GTGAAFAYSL
WNTVEIGLGV EVARRVMDLY YESAAVLIAL VSLGKYFELR SRTRTSEAIK ALMELAPDTA
LRMEGGEARE VPVASVRVGD RLLVRPGARI AVDGVVEDGT SSVDEAMLTG ESLPVTKNPG
DPVAGGTINR HGSFVMRAER VGADTVLARI IRLVQDAQGS KAPIANLADR VSLWFVPAVM
ALAVLAGVAW YAAGAEFAFA LRIFVAVMVI ACPCAMGLAT PTSIMVGTGR GAQLGVLIKS
GEALEQAGRL TALVFDKTGT LTVGSPRLTD VVLLTDVVPL TDVAALTDAA TAGAAGEAAP
AHGDAHFDES ALVRLAASLE ALSEHPLAEA VAAGATERGL APWPVQDFLA VPGKGVRGSV
VTDDGAQRAV AIGNVAFMAA ENVAGHDAPH VTARADALAE QGRTPLYMAV DGRMAALLGV
ADPLKPEAPA VVRRLRDMGV RVVMLTGDNR RTALAVARQA GIDDVRAEVL PDQKEQAVSA
LQAEGHVVGM VGDGINDAPA LARAHVGIAM GTGIDVAVEA GDIVLLRGGL DGVLTALALS
RATVRNIRQN LFWAFGYNVL GIPVAAGLLH AFGGPTLSPM IAGGAMALSS VSVVSNALRL
RFFTPDDGSA DGPETNPETS PAASPETSPE GAGKNA
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