| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3146 |
|---|
| Symbol | |
|---|
| ID | 7175092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 3969273 |
|---|
| End bp | 3970139 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643541682 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_002437550 |
|---|
| Protein GI | 218888229 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 79 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCGC CGGGCCAAGA CGTGTCCATA TCCGGGGGGT CCGCCGTATC CTCGGAGTCT
GCCCCGGCAT CCACCGCGCC CGAATCCGCA ATCAACGGAC CAGCGCACCC CGGCGGTCCG
CGAACCACCC CGGCCCCGGC CCGTCCGGCC AAGAGGTCTG GCGGGGGTTC CGCCGTGCTC
ATCGCCACCT ACGACTGGCC ACCCTACGTG GAACACAATC TGCCGCACGG CGGCTACGTG
GCGCGGGTTA TCCGGGCCGC GCTGGCCTCC GTGGGGCTTG AGGCGCGCTT CGAATTCATG
CCGTGGGCCA GAGGCATGTC CCTGCTGCGC GACGGCAAGG TGACCGCCGT GGCGCCCGCC
TACAGAACCG TCGACCGGGA AATCGAATGC GACCTGTCCG CCCCGTTCCC CGGCGGCCCG
CTGGCGTTGT TCGGACTGAC GCCCAACGCC CTGCACTGGA GCGACCTGCG CGACCTGGCG
GGGCTGCGCA TCGGCGTGGT GCGCGGGTAC GCCCACACCC AGGACTTCGA CGCCGCAGCC
TTCCTGAGCA AGGAACCCGC CAACGACGAA CTGGCCAACC TGCGCAAGCT GCTGGCCAGG
CGCATCGACG CCATGGCCGC GGACCGCAAC GTGGTGCACT TTCTGCTGCG GCGCCACCTG
CCGGCACAGG CCGCCAGCCT TGCAGAATTC GACCCCATCC TGGGCGAACG CGACCTGCAT
GTGTGCTTTT CACGCGCGAG GCCCGACCAT GCCGCCCTGC GCGAGGCCTT CGACAGGGGG
CTGGCCACCA TACGCGCCTC CGGGCTGCTG GACGAACTGC ACCGCGAAAT GCGTCGCCTG
ACCGAGGAGC AACCGGCAGG GCAATAA
|
|---|
| Protein sequence | MPAPGQDVSI SGGSAVSSES APASTAPESA INGPAHPGGP RTTPAPARPA KRSGGGSAVL
IATYDWPPYV EHNLPHGGYV ARVIRAALAS VGLEARFEFM PWARGMSLLR DGKVTAVAPA
YRTVDREIEC DLSAPFPGGP LALFGLTPNA LHWSDLRDLA GLRIGVVRGY AHTQDFDAAA
FLSKEPANDE LANLRKLLAR RIDAMAADRN VVHFLLRRHL PAQAASLAEF DPILGERDLH
VCFSRARPDH AALREAFDRG LATIRASGLL DELHREMRRL TEEQPAGQ
|
|---|
| |