Gene DvMF_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3093 
Symbol 
ID7175039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp3905175 
End bp3906404 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content64% 
IMG OID643541630 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_002437498 
Protein GI218888177 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.0810119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATTT GCAAGACCGA GGAAGCCATC GAGGAAATCC GCAAGGGTAA GATGATCATC 
CTCGTGGACG ACGAAGACCG CGAGAACGAA GGCGACCTGA CCATCGCCGC CGAACACGTC 
ACCCCCGAGA TCATCAACTT CATGGCCACG CACGGGCGCG GCCTGATCTG CCTGGCCCTT 
GAACCGGCCC AGGTGGACAA GCTGCAACTG CCCATGATGA CCCGCCGCAA CGGCTCGAAG 
TTCGGCACCA ACTTCACGGT GTCCATCGAG GCGCGCAAGG GCGTGACCAC AGGCATCTCC 
GCCGCCGACC GCGCCACCAC CATCCTGGCT GCCGTGGCCG ACGAGGCCCA GCCCGAAGAC 
CTGGTGACCC CCGGCCACAT CTTTCCGCTG CGGGCCCAGA AGGGCGGCGT CATGGTGCGC 
GCCGGGCAGA CCGAGGGCAG CGTCGATCTG TCGCGGCTGG CCGGGCTGAA GGGCGCGGCG 
GTGATCTGCG AGATCATGCG CGACGACGGC GAAATGGCCC GCATGCCCGA CCTGATCGAG 
TTCGCGAAAA AGCACGACAT GAAGATCGCC ACCATCCGCG ATCTGATCCG CTACCGCATG 
CAGTCGGGCC TGCTGTCCGT GAAGCGCGTG GCCGAAGCGC AGATGCCCAC CAAGTACGGC 
GAATTCCGCG TCATCGCGTA CGAGAACGAA CTGCACGACG AAACCCACTT GGCGCTGGTC 
AAGGGCGACA TCACCCCCGG CGAACCGGTG CTGGTGCGCG TGCACAGCGA ATGCCTGACC 
GGCGACGTGC TGGGTTCCAT GCGCTGCGAC TGCGGCGGCC AGCTGGCGGC GGCCATGTGC 
CAGATCGCGG GCGAGGGCAA GGGCGTGCTG TTGTACATGC GCCAGGAAGG GCGCGGCATC 
GGCCTTGCCA ACAAGATCCG CGCCTATGCC TTGCAGGACC AGGGCTACGA CACCGTGGAG 
GCCAACCACA AGCTGGGCTT CAAGGCGGAC CTGCGCGACT ACGGCATCGG CGCGCAGATA 
CTGGTGGACC TTGGCGTGCG CAAGATGCGC ATGATGACCA ACAACCCCAA GAAGATCATC 
GGCCTTGAAG GCTACGGCAT CGAGGTGGTG GAACGGGTTC CCGTGGAGCT GGAATCCTGC 
TCCTTCAACG AGACGTACCT GCGCACCAAG AAGGAGAAGA TGGGCCATCT TCTCGAACTG 
AAGCACCACG ACGCGCCGAC CGAAATCTAA
 
Protein sequence
MPICKTEEAI EEIRKGKMII LVDDEDRENE GDLTIAAEHV TPEIINFMAT HGRGLICLAL 
EPAQVDKLQL PMMTRRNGSK FGTNFTVSIE ARKGVTTGIS AADRATTILA AVADEAQPED 
LVTPGHIFPL RAQKGGVMVR AGQTEGSVDL SRLAGLKGAA VICEIMRDDG EMARMPDLIE 
FAKKHDMKIA TIRDLIRYRM QSGLLSVKRV AEAQMPTKYG EFRVIAYENE LHDETHLALV 
KGDITPGEPV LVRVHSECLT GDVLGSMRCD CGGQLAAAMC QIAGEGKGVL LYMRQEGRGI 
GLANKIRAYA LQDQGYDTVE ANHKLGFKAD LRDYGIGAQI LVDLGVRKMR MMTNNPKKII 
GLEGYGIEVV ERVPVELESC SFNETYLRTK KEKMGHLLEL KHHDAPTEI