| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3084 |
|---|
| Symbol | |
|---|
| ID | 7175030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 3895393 |
|---|
| End bp | 3898089 |
|---|
| Gene Length | 2697 bp |
|---|
| Protein Length | 898 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643541621 |
|---|
| Product | ATP-dependent protease La |
|---|
| Protein accession | YP_002437489 |
|---|
| Protein GI | 218888168 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
|---|
| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 0.981667 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG ACATATACGA CGACGGCCCC CCCGACGAAT CCGGCCAAAC CACCGGCAAG
CCGCAAAAGA AGCAGGACTC GGCGTCCGCA GGCCCTGCCG CCGATGCGGC CTCCGGTCCG
GCCCCCGACG CCGCGCCCGA CGCCGCAAAT GGCGTCACCG TCATCGCCGT CCAGACCGGC
GACCAGGCTG ACCCAGAACA GGTTGCACCG GATCAGCCCG CTCCGGGCAA GGCTGCCGGC
ATCGAGGTTG CCGTGTCCAC GCAGCCGCGC GCCGGTGACG ATGCCCGCGC CCTGGATTTC
GACGGCCTGA GCGCCCCCGA CGCGGACAAT CCTGGCGGCT CCGAATCTTC GGAGACGCCC
GAGGGTCCGG AACTGCCCGT GCTGCCAGAC GAACTGCCCG TGCTGCCCGT GCGCGACGTG
GTGGTGTTCA ACTACATGAT CCTGCCCCTG TTCGTGGGCC GCGAAAAGTC GGTGCAGGCC
GTGGACGCCG CCCTCAACGG CAGCCGCTAC CTGATGATCT GCACCCAGCG CGACGAATCG
GTGGACGACC CCGCGCCGGA AGACCTGCAC CCCACCGGCA CGGTTGTCAT GATCATGCGC
ATGCTGAAGA TGCCCGACAA CCGGCTGAAG GTGCTGGTGC AGGGCATCAG CCGCGCCCGC
GTGGAATCCT TCGGCGCGGG CGAGGGCTAC CTTACCGCCC GCGTGGAAAC CCTGCCCGAG
CCGGAACTGG GCCCGCCCAC GGTGGAGCAG GAAGCCATGA TGCGCGCCGC CCGCGAACAG
AGCGAAAAGA TCCTTTCGCT GCGCGGCATC GCCACCTCGG ACATCATGGC CGTGCTCAAT
TCCGTGGACG ATCCGGGCCG CCTTGCCGAC CTCATCGCCG CCAACCTGCG CATGAAGGTT
TCCGACGCGC AGGCCATCCT GGAATGCACC GACCCCGACG CCCGGCTGCG CCTCGTCAAC
GAGCAGCTGG TCAAGGAAGT GGAAGTGGCG TCCATGCAGG CCAAGATACA GAGCATGGCG
CGCGAGGGCA TGGACAAGGC CCAGAAGGAC TACTTCCTGC GCGAGCAGAT GAAGGCCATC
CGCCGCGAAC TGGGCGAATC GGGCAACGAG GACGAGGAAC TGGAAGACCT CACCCGCTCT
CTGGAACGTT CCGGATTGCC GCGTGAAGTC CGCAAGGAGG CCGACAAGCA GTTGCGCCGC
CTGGCCTCCA TGCACCCCGA TTCGTCCGAG GCCACCGTGG TGCGCACCTA CCTGGAATGG
CTGGCGGAGC TGCCGTGGGC CAAGCTTTCG CGCGACCGGC TGGACATCAA CAAGGCCAAG
GTGATCCTGG ACGAGGACCA TCTCGGCCTC GCCAAGGTCA AGGACCGCAT TCTGGAATAC
CTCAGCGTGC GCAAGCTGAA CCCCAAGTCC AAGGGGCCCA TCCTGTGCTT TGCCGGGCCT
CCCGGCGTGG GCAAGACCTC GCTGGGCCGC TCCATCGCCC GCGCCATGGG TCGCAAGTTC
CAGCGCATCT CGCTGGGCGG CATGCGCGAC GAGGCGGAAA TCCGCGGCCA CCGGCGCACC
TACATCGGCG CCATGCCGGG GCGCATCGTG CAGAGCCTGA AGCAGCTGGG CACGCGCAAC
CCCGTGCTGA TGCTGGATGA AATCGACAAG ATCGGCTCCG ACTTCCGGGG CGACCCGTCA
TCCGCGCTGC TGGAGGTGCT GGACCCGGAA CAGAACTTCT CGTTCAGCGA CCACTACCTG
AACGTGCCCT TCGACCTGTC CAAGGTCATG TTCATCTGCA CCGCCAACCA GCTGGACACC
ATTCCCCCGC CCCTGCGCGA CCGCATGGAG GTCATCTCCA TTCCCGGCTA CACCATGCAG
GAAAAGCTGG CCATCGCCCG CCGCTACCTG CTGCCGCGCC AGGCCAGGGA AAACGGCCTG
TCCCCGCGCG AGGTGACCGT GCCCGACGCG CTCATCGAGC GCATCATCAC CGGCTACACC
CGCGAGGCAG GGCTGCGGAA CCTGGAGCGC GAAATCGGCT CGCTGTGCCG CAAGGTGGCC
CGCCGCAAGG CAGAGGGCGA AAAAGGCCCC TTCCGGGTCA CCCCGCGCAT GCTGGAAAAG
CTGCTGGGCG CGCCCCGCTT CATCGACGAG GAAAAGGAAG CCGAACTGCT GCCCGGCGTG
GCCCTGGGCC TGGCCTGGAC CCCCTACGGC GGCGAGGTGC TGCACGTGGA AGTCACCCCC
ATGAAGGGCA AGGGCGGCGT GACCATGACC GGCCAGCTCG GCGACGTGAT GAAGGAAAGC
GCACAGGCCG CCATCTCTTA CGCGCGCAGC CGCGCCGAAC AGCTGGGCAT CGAGCCCGAC
TTCTCGGAAA AGCTCGACCT GCACATCCAC GTGCCCGCGG GCGCCACCCC CAAGGATGGC
CCCTCCGCCG GGGTGACCAT GGTCACCGCG CTGCTCTCCG CCATCACCGG CAAGTCCGTG
CGCAGCGACC TGTGCATGAC CGGCGAGATC ACCCTGCGAG GCCGCGTGCT GCCCGTGGGC
GGCATCAAGG AAAAGATCCT GGCCGGGGTG GCGCGCGGCA TGCAGCACGT CATTATCCCG
CGCCAGAACG TCAAGGACCT GGAAGACATT CCCGCAGACC TGCTGCGCCG CATCCAGGTT
CACCCCGTGG CCCACATCGA CGATCTGCTG CCTCTGGCGT TTCCGAAAGG CGAATAA
|
|---|
| Protein sequence | MTDDIYDDGP PDESGQTTGK PQKKQDSASA GPAADAASGP APDAAPDAAN GVTVIAVQTG
DQADPEQVAP DQPAPGKAAG IEVAVSTQPR AGDDARALDF DGLSAPDADN PGGSESSETP
EGPELPVLPD ELPVLPVRDV VVFNYMILPL FVGREKSVQA VDAALNGSRY LMICTQRDES
VDDPAPEDLH PTGTVVMIMR MLKMPDNRLK VLVQGISRAR VESFGAGEGY LTARVETLPE
PELGPPTVEQ EAMMRAAREQ SEKILSLRGI ATSDIMAVLN SVDDPGRLAD LIAANLRMKV
SDAQAILECT DPDARLRLVN EQLVKEVEVA SMQAKIQSMA REGMDKAQKD YFLREQMKAI
RRELGESGNE DEELEDLTRS LERSGLPREV RKEADKQLRR LASMHPDSSE ATVVRTYLEW
LAELPWAKLS RDRLDINKAK VILDEDHLGL AKVKDRILEY LSVRKLNPKS KGPILCFAGP
PGVGKTSLGR SIARAMGRKF QRISLGGMRD EAEIRGHRRT YIGAMPGRIV QSLKQLGTRN
PVLMLDEIDK IGSDFRGDPS SALLEVLDPE QNFSFSDHYL NVPFDLSKVM FICTANQLDT
IPPPLRDRME VISIPGYTMQ EKLAIARRYL LPRQARENGL SPREVTVPDA LIERIITGYT
REAGLRNLER EIGSLCRKVA RRKAEGEKGP FRVTPRMLEK LLGAPRFIDE EKEAELLPGV
ALGLAWTPYG GEVLHVEVTP MKGKGGVTMT GQLGDVMKES AQAAISYARS RAEQLGIEPD
FSEKLDLHIH VPAGATPKDG PSAGVTMVTA LLSAITGKSV RSDLCMTGEI TLRGRVLPVG
GIKEKILAGV ARGMQHVIIP RQNVKDLEDI PADLLRRIQV HPVAHIDDLL PLAFPKGE
|
|---|
| |