| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3057 |
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| Symbol | |
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| ID | 7175003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3858618 |
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| End bp | 3860351 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643541594 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002437462 |
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| Protein GI | 218888141 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.186187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTTCG CCGAACTGCC CCTTGACGCC CGCCTGCTGG CCGGGGTGGA AAGCATGGGC
TACCATCTGC CCACCCCCGT GCAGCGCCGG GCCATTCCCG CCGCGCTGTC CGGGCGCGAC
GTGCTGGCCC TGGCCGCCAC CGGCACCGGC AAGACCGCCG CCTACGCGTT GCCGTTGCTG
CAACGCCTGC TGGAAGGGCC GCGCGGGCAG GTGCGGGCGC TGGTGGTGGC CCCCACGCGC
GAACTGGCCG AGCAGATCCA CGACCACATC CGACGGCTGG GCTCCATGAC CCGCCTGCGC
TCCACCACCA TCTACGGCGG GGTGGGCATC ATGCCGCAGG CCCTGCGGCT GCGCACCGGG
GTGGAGATCG TGGTGGCCTG TCCCGGGCGG CTGCTGGACC ACCTGCGACG CGGCAACCTG
GACCTTTCCG CCCTTGACGT GCTGGTGCTG GACGAGGGCG ATTCGCTGTT CGAACTGGGC
TTTCTGGCCG ACGTGCGGGC GTTGCTGGCC GCCGTGCCCG CGCGGTGTCA GCGCATGCTG
TTTTCCGCCA CCTTGCCGCA GGCCGTGCAA GGCCTGGCGG GCGAGGCCCT GCGCGACCCC
GTGACCGTCA GCGTGGACGC GCAGGCCCCG GCGGCCACCG TGGACCATGC CCTGTATCCG
GTGCCCGCCC ACCTCAAGAC CCCGCTGCTG AAGGCCATGC TGCGCGCCCG GCTGCTGCCC
GGCGTGGCTG CGCACGCCGG GACGGCCCAT GCTCCCGGCA TGCCCGGCAT GCCCGGCATG
CCCGATATGC CCGATATGCC CGCCATGCCT GACATGCCTG ACATGCCTGA CATGCCTGAC
ATGCCGGATG ACATCGGCGG CGGCATTGAT GACGAGGGTG GCGACGGCTT CGATGCCGAC
GACGCTGGCG CTTTCGCCGG GGATGCGGGC GGAGGCTATC CGCCCCTGCA CTTCGGCGAG
GACGAACCCT TGGCCGGTGC GGTGCTGGTG TTCGTGCGCA CCCGGCACGG GGCGCGCCGC
CTGTGGCAGC AGCTGGCGTC CACCGGGCTG CGCGTGGGGT GCCTGCAAGG CAAGCTTTCG
CAGCGGCGGC GTCAGGCGAC CCTGGACGGG TTTCGCACCG GGCGCTACGC CGTGCTGGTG
GCCACCGACG TGGCCGCGCG CGGGCTGGAC ATTTCGCGGG TGACCCACGT GGTGAATTAC
GACGTGCCCG CCACGGCGGA CGCCTACATC CACCGCATCG GTCGCACCGG TCGCGCCGCC
CGCGCGGGCA CGGCCATGAC CCTGGTGGCT CCCGGCGACG AGACGGCGGT ACGCCACATA
GAGCGCGCCC TGGGCGGCCC GGTGACCCGC TGCCGCTTCG AGGGCTTCGA CTACGGCGCG
GCGGCACGCA GCCCGGAAGG GGCGCGCCCC GCCCTGCCGC CCCGGCAGGC CCGCCTGCCC
GGCGGGCGCA AGCCGCAGTT GCAACCCGCC GAGGCCCCGG AACCGCCGCG TCAGCCCGCC
CGGCCCCGCC CGGCCCGCCA TGCCGTGCCC CCGGCGGCCC AGGGCGGCGC GCCGCAGCCG
CAGGGTCAGC AGGCGGCCAA GTCCGCCAGG CCGCAGTCCG GCCCCGGCAC TTCCGGGCAT
GCGGGGCAGG ATGCGCGCGC CAAGGGCGGT CGGGACGGCA TGGGGCGCGA GGGCGGGGGG
CGTGGCCCTT CCGGTGGCTC CGCTGGCGGC TCCGGTTCCC ACTCCGCAGG CTGA
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| Protein sequence | MTFAELPLDA RLLAGVESMG YHLPTPVQRR AIPAALSGRD VLALAATGTG KTAAYALPLL
QRLLEGPRGQ VRALVVAPTR ELAEQIHDHI RRLGSMTRLR STTIYGGVGI MPQALRLRTG
VEIVVACPGR LLDHLRRGNL DLSALDVLVL DEGDSLFELG FLADVRALLA AVPARCQRML
FSATLPQAVQ GLAGEALRDP VTVSVDAQAP AATVDHALYP VPAHLKTPLL KAMLRARLLP
GVAAHAGTAH APGMPGMPGM PDMPDMPAMP DMPDMPDMPD MPDDIGGGID DEGGDGFDAD
DAGAFAGDAG GGYPPLHFGE DEPLAGAVLV FVRTRHGARR LWQQLASTGL RVGCLQGKLS
QRRRQATLDG FRTGRYAVLV ATDVAARGLD ISRVTHVVNY DVPATADAYI HRIGRTGRAA
RAGTAMTLVA PGDETAVRHI ERALGGPVTR CRFEGFDYGA AARSPEGARP ALPPRQARLP
GGRKPQLQPA EAPEPPRQPA RPRPARHAVP PAAQGGAPQP QGQQAAKSAR PQSGPGTSGH
AGQDARAKGG RDGMGREGGG RGPSGGSAGG SGSHSAG
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