Gene DvMF_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3055 
Symbol 
ID7175001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp3856372 
End bp3857100 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content68% 
IMG OID643541592 
Productpeptide methionine sulfoxide reductase 
Protein accessionYP_002437460 
Protein GI218888139 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.195694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCC TGCTTCAGTC CCCGTTCATC GAGACCGCAA CGTCGGCGCT GACCGCGCTG 
GCGACCCATC CTGCCCTGTC CGGCCTGTCC GGCTTGTCAG CCATATCCGG CCTGCTGCTG
ACCCCGCTGC TGCTGGCCGC CCTGCTGCTG CCCGCCACGG CCCGCGCCGC GCAGGACAAT
ACCGCCGCGC CCCCCCGCCA GGCCGCCGCA ACGGCCACCG CCGTGTTCGC CGGGGGCTGC
TTCTGGTGCA TGGAAAAGCC CTTCGACCAA CTGGACGGCG TGCTGGAAAC CACCTCCGGC
TACACCGGGG GCAACGTGGA TTCCCCCACC TACAAACAGG TGTCCTCGGG CCTTACCGGC
CACGCCGAAG CCCTGCGGGT GACCTACGAC CCGGCCAGGG TGACGTACGA AGCGCTGCTG
GACGTCTTCT GGCGCAACGT GGACCCGCTG GACGCGGGCG GCCAGTTCTG CGACCGGGGC
AACCAGTACC GCTCGGCCAT CTTCGTGGCC GATGCGGCGC AGCGCGAGGC CGCCGAGACA
AGCAAGAAGG CGGTGGAGGC GCGCCTGGGC AAGCCGGTTG CCACCGGCAT AGAGATGGCC
GGAACCTTCT GGCCCGCCGA GGAATACCAT CAGGACTACT ACCGCAAGAA TCCCATCCGC
TATGCCTACT ATCGGACCGG CTGCGGGCGC GACAAGCGGC TGGAACAGGT CTGGGGCGCA
GAAAAATGA
 
Protein sequence
MSTLLQSPFI ETATSALTAL ATHPALSGLS GLSAISGLLL TPLLLAALLL PATARAAQDN 
TAAPPRQAAA TATAVFAGGC FWCMEKPFDQ LDGVLETTSG YTGGNVDSPT YKQVSSGLTG
HAEALRVTYD PARVTYEALL DVFWRNVDPL DAGGQFCDRG NQYRSAIFVA DAAQREAAET
SKKAVEARLG KPVATGIEMA GTFWPAEEYH QDYYRKNPIR YAYYRTGCGR DKRLEQVWGA
EK