| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3010 |
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| Symbol | |
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| ID | 7174954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3796862 |
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| End bp | 3798667 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643541545 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002437415 |
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| Protein GI | 218888094 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 101 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCCA TGTCTCCCCT CTCCCCTCCA TCCGGAGACA CCCCGTCCAG CCGACCGACG
CCCGGTGCCA CGGAACCCAC CCTGGCCCAT TCGGTGCTCC AGCAGTTCGA CATCAGCCCG
TTCCTGGACA TGATGCTCAA CGTGGCCCAG GAACGCACCG TGGAGGGGCT GCTGGAACTG
ACACACCGCG TCAACCGGGG CACCCACGTC ATGTGCGGAT GCATCTGGTT CGTGGATGCG
CCGCCCCCGG CATCCGGCAC CGCCTCCGGC CCCGGCGAGG GCGACCCTGT ACTGCGCCTG
ATGACCGTGG CCGGGCACAC CACCACCCCG GTACGCGACT GGCGCCATAC AGAAGGCACC
TATGCCATGG TGCCGCTGTC CGAACCGCTG GTGGGGCAGG TGGCCCTGCG CGGCGAGCCC
ACGTGGGCGG CATCGCCCGA GGACTGGGCC CGGCCGGCCT GGGCCGTGGA CGAGTCCATC
CACGCCTACG CCGCCTATCC GTTGCAGTTC AAGGGCAACA TGATCGGGGT CATGGCCGTG
TTCTACGACC GGCCCATGCG CGGGGTGCTG GCCGACCTGA TGCTGCTGCA CCGCAAGATG
CACAAGATTT TCGCCGACTC CCTGTCCGCC GCCGTGGTCA ACGCCCGCTC CTTCGAGGAA
ATCCAGCACC TGCGCCGGGC GCTGGAACTG GAAAACGAGC ACCTGCGCGG CGAGGTGCGC
CGTGCCCGCG CGCCGCACTC CATCGTGGGC GACAGCCCGC CCCTGCGCCG GGCCCTGGAA
CAGGTGGACA TGGTGGCCCC CACCGACGCC ACCGTGCTGC TGCTGGGCGA ATCGGGCACC
GGCAAGGAAC TGGTGGCCCA GGCCATCCAC GACCGCAGCC AGCGCGCCGC CGCGCCGTTA
GTGCGGGTGA ACTGTTCCGC CATCCCGCGC GAACTGTTCG AAAGCGAATT CTTCGGCCAT
GTGAAGGGCG CCTTCACCGG TGCCCTGCGC GACCGGGTGG GCCGCTTTCA ACTGGCCGAC
GGCGGCACCC TGTTTCTGGA CGAAGTGGGA GAAATACCCC TGGAATTGCA GGGAAAGCTG
TTGCGCGTGC TGCAAGAGGG GGTGTTCGAG CGGGTGGGCG AGGAACGCAG CCGCAGCGTG
GACGTGCGCA TCATCGCCGC CACCAACCGC GACCTGCGGG CCGACGTGGA GCATGGGCGC
TTCCGGCAGG ACCTGTTCTT CCGGCTCAGC GTGTTCCCGG TGGCCCTGCC GCCCCTGCGC
GCCCGGCGTG ATGACATCCC CCTGCTGGCC CGGCACTTCG TGCGGGCCTC GTGCCGCCGC
CTGAACCTGC CGGAGCCGCG CATCGCCCAC CGCCAGATGG CCGAACTGCA ATCCTACCCC
TGGCCGGGCA ACGTGCGCGA ATTGCAGAAC GTCATCGAGC GCGGGGTGAT CATGGCCGAA
GGGGGACGGC TGGTGCTGGA TCTGCCGCCG GAAGGCGGGA TGCAGGCCGT GTCCCCCGGC
GCCGCGTTCG GCATGCCGGG TGGCGCGAGC CCCGTGGAGG GGGGCGGCGC CCACGACGCG
CCCTGGGGAA CGGGTGAAAC AGGAAGCGCC GGAAAAACCG CGGATTTCGG GCAAACGGGC
GCACCGGACC CCGCCGGGAT CATTTCCGAA GCACACTGGC GCGAATTGCA GCGCGCCAAC
ATCGAACGCG CCCTTACGGC GGCGGGCGGG CGCGTGCATG GTCCCGGCGG CGCGGCGGAA
CTGCTGGGCC TGCCGCCCAC CACCCTGCAA TCGCGCATGA AGACACTGGG GTTGCGCGGG
CGCTGA
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| Protein sequence | MPPMSPLSPP SGDTPSSRPT PGATEPTLAH SVLQQFDISP FLDMMLNVAQ ERTVEGLLEL
THRVNRGTHV MCGCIWFVDA PPPASGTASG PGEGDPVLRL MTVAGHTTTP VRDWRHTEGT
YAMVPLSEPL VGQVALRGEP TWAASPEDWA RPAWAVDESI HAYAAYPLQF KGNMIGVMAV
FYDRPMRGVL ADLMLLHRKM HKIFADSLSA AVVNARSFEE IQHLRRALEL ENEHLRGEVR
RARAPHSIVG DSPPLRRALE QVDMVAPTDA TVLLLGESGT GKELVAQAIH DRSQRAAAPL
VRVNCSAIPR ELFESEFFGH VKGAFTGALR DRVGRFQLAD GGTLFLDEVG EIPLELQGKL
LRVLQEGVFE RVGEERSRSV DVRIIAATNR DLRADVEHGR FRQDLFFRLS VFPVALPPLR
ARRDDIPLLA RHFVRASCRR LNLPEPRIAH RQMAELQSYP WPGNVRELQN VIERGVIMAE
GGRLVLDLPP EGGMQAVSPG AAFGMPGGAS PVEGGGAHDA PWGTGETGSA GKTADFGQTG
APDPAGIISE AHWRELQRAN IERALTAAGG RVHGPGGAAE LLGLPPTTLQ SRMKTLGLRG
R
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