Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2840 |
Symbol | |
ID | 7174781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3587862 |
End bp | 3589073 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643541373 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_002437246 |
Protein GI | 218887925 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 91 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCGCGC ACCAGCCCAT CTTCGACGCT TCAGGGCATA CTTTCGGGTT TGAACTGTTG TACCGGAATG CATGCTGGCC CTCCAGCAAT TGCCCGCCGT TCTCCGATGC CGTCGCCACG GCATCGGTCA TCATCGACGG CCTGCCACTG ATCATGGACA CCCTGGGCGA CAACCGGATG CTGTTCGTCA ACTTCGACGA GTCCCTGCTG CTCAGCGGCC TTGCCAACAT GCTCGACCCG GCCCGCACCT GCGTCGAGGT GCTGGAAACC ACGCAGCCCA CGCCCGGCAT TCTGGCGCAA CTGGCCGCGC TCAAGCGGCG CGGATTCACC ATCGCCCTCG ACGACTATGC AGGGGCCGGA CCGGCAGACG CGCTGCTGCC GATGGCAGAC TACGTGAAAG TGGAAGTGCT GCGCAGGCCG CGCGCCGACG TGGCGCGGGA CGTGGAGAGG ATGCTTGCGG CGGGCGTCAG GGTTGTGGCC GAAAAGATCG AGGACCAGTC CACCCTGGAA TATTGCCGCA AGCTGGGCTG CCATCTGTTT CAGGGATACT TCCTGTCGCG CCCGCAACTG ACCTCCGGGT GCACGGTCAG CACCACCCAG GCCCTGCGGC TGAAAACCAT CAAGATATTC GCCTCCGGCG GCACCACCAC GCCGCGCCTC ATCGAGGCCA TCAGGGCCGA CGTCTCGCTG TCCTACCGGC TGTTGCGCTA CCTGAATTCC GCGCATTTCT CCTTCAGTTC GCGGGTTTCG TCCGTGGAGT TCGCGGCCAG GCTCATGGGC GAGACGGGCT TGCGCCGGTG GCTGTGCGCC GCCCTGCTTT CGGGCATCGC CAAGGGGCCG TTCGTGCCGG AACTGATCCG CATGTCGGTG TTCAGGGGCG TCTTTGCCGA GGCCCTGCGC AACAGCACCA CGGGCGGGCC ACCGGCGGAC CGGTTGTACC TGGCCGGGTT GTTTTCGCTG CTGGACGCGA TCCTGGGCAT GCCCATGGAG ACGATTCTGG CGGATATCCG GCTCAGCAGC GACATCGACG AGGCGCTCAT CGAGCGGCGC GGCGCGCTGG CTCACTGGCT GCACGTGGTG GAATCATACG AACGGGGAGA CTTTGGCGAT GCCGCACGGG GCTTCGCCGA ACTGGGACTG GACATGTCAC TGCTGACGCA CCGTTATCTG CAAGCCCTGA ACGTGTCGCA GAGCATCTGC ACGACGCAGT AG
|
Protein sequence | MVAHQPIFDA SGHTFGFELL YRNACWPSSN CPPFSDAVAT ASVIIDGLPL IMDTLGDNRM LFVNFDESLL LSGLANMLDP ARTCVEVLET TQPTPGILAQ LAALKRRGFT IALDDYAGAG PADALLPMAD YVKVEVLRRP RADVARDVER MLAAGVRVVA EKIEDQSTLE YCRKLGCHLF QGYFLSRPQL TSGCTVSTTQ ALRLKTIKIF ASGGTTTPRL IEAIRADVSL SYRLLRYLNS AHFSFSSRVS SVEFAARLMG ETGLRRWLCA ALLSGIAKGP FVPELIRMSV FRGVFAEALR NSTTGGPPAD RLYLAGLFSL LDAILGMPME TILADIRLSS DIDEALIERR GALAHWLHVV ESYERGDFGD AARGFAELGL DMSLLTHRYL QALNVSQSIC TTQ
|
| |