Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2788 |
Symbol | |
ID | 7174727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3530154 |
End bp | 3530885 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643541320 |
Product | ABC transporter related |
Protein accession | YP_002437194 |
Protein GI | 218887873 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCAAAT TCGACCATGT GCACAAGTGG TACGCCAGCG GACTGCATGT GCTGCAAGAT ATCACCCTTG AAATCAAGCA GGGCGAGGTT GTCGTCATCT GCGGGCCCAG CGGGTCCGGC AAGAGCACGC TGATCCGCTG CATCAACAAG CTGGAGCCCA TCCAGAAGGG CCACATCGTC GTCGACGGCG TGGACATCAA CGACCCGCGC ACCAATCTCA CCATGCTGCG CGCCGAAGTG GGCTTCGTCT TCCAGCAGTT CAACCTGTAT CCGCACATGA CCGTGCTGGA AAACATCACC CTGGCCCCCC TGCTGGTGCG CAACACCCCC CGCGCCGAAG CCGAAAAGAC GGCCATGGAG CTGCTGGAAA AGGTGAACAT TCCCGACAAG GCGGGCGCCT ACCCCGGCCA GCTTTCCGGC GGGCAGCAGC AGCGCGTGGC CATCGCGCGG GGCCTGGCCA TGAAGCCGCG CATCATGCTG TTCGACGAAC CCACCAGCGC GCTGGACCCG GAAATGATCA ACGAGGTGCT CGACGTCATG CGCCAGCTTG CCCGCGAGGG CATGACCATG GTCTGCGTGA CGCACGAAAT GGGCTTTGCC CGTGAGGTGG CCGACCGGGT CATCTTCATG GATCAGGGCG TCATGGTGGA AGAAAACACC CCAGAGGCGT TCTTCAGCAA TCCCGTCCAC GACCGCACCA AGGAATTTCT CAGCAAGATT CTCACGCACT AG
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Protein sequence | MIKFDHVHKW YASGLHVLQD ITLEIKQGEV VVICGPSGSG KSTLIRCINK LEPIQKGHIV VDGVDINDPR TNLTMLRAEV GFVFQQFNLY PHMTVLENIT LAPLLVRNTP RAEAEKTAME LLEKVNIPDK AGAYPGQLSG GQQQRVAIAR GLAMKPRIML FDEPTSALDP EMINEVLDVM RQLAREGMTM VCVTHEMGFA REVADRVIFM DQGVMVEENT PEAFFSNPVH DRTKEFLSKI LTH
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