Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2738 |
Symbol | |
ID | 7174677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3463715 |
End bp | 3465589 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643541271 |
Product | type II secretion system protein E |
Protein accession | YP_002437145 |
Protein GI | 218887824 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTGG CCGAACGACT GATGCGCACC ACGCGGCGGC AACCCGCCCC CGCGCTGCAT CTGGAACCCG TGGCGTCCGA GGATGCCCGT ACGGGCAACG CCCCCCATGG GACAGAGGAC GACGCACAGG CCCATGCCGA TGTCTACGGC CACCTGCAAC TCGATCCGGA CGGTCTGGAC CAGAACCAGG GCCAGGACCA GGGCCGGGGC GACGGCATGC CGCAGGCGCC GCGCCTTGGC GCCTCGGGCC TGAACGCCCG CAGCCACCTT TCCGCCGTTC CCCCCGCCGC CACGGTCGGC ATGGCCATCC AGCCCGACAC CGCACGCCTC GATGCGCCGG ACGAGGCCGA CACCGCGCCC ATTCCGCGCG TGCCGGTCAA CGACGCCACC CTGTTCCGCG CGCCGCGCCC CGAATCCGCA CCGGTGTCCG AATCCGCAAC GCTGGCCGCG CCCCGTGCCG ACGCCCCGGA AGCACAGCCC GCAGACGCGC AGGCCACCCA AGCGGGCCAA ACCGGAAAGT CCCGTCCGTC GGCACGACCC GCCGCCCGCC CCGCCAGCGC GGAGCAGGTA TGCGACGTGA CAACCCTGAC CCTGCACGGC GACCACTACT ACGAAATCCG CGCCCGCCTG CAGGACCGCC TGCTGGAGAT GATGGACCTG GCCGCCGCCG AATCGCTGCC GCCCGACAGG CTGGCCGCCG AAATTTCCCG CCTGGTGGAA AAGCTGCTGC GCGAGGAGTT CCGTCAGGCC CCCCTCAATG CGCAGGAACA GCGCCAGCTG GTGGAGGACA TCCGCGACGA GGTCATGGGC CTTGGCCCGC TGGAACCGCT GCTGCGCGAC CCCACGGTCA ACGACATACT GGTGAACAAC TACCGCATGG TCTACGTGGA ACGGCGCGGC AAGCTGATCC GGGTCAACAC CCGCTTCCTG GACGACGACC ACCTGCGCAA GATCATCGAC CGCATCGTGG CCCGCATAGG CCGCCGCGTG GACGAGGCAT CGCCCATGGT GGACGCCCGC CTGGCCGACG GTTCGCGCGT CAACGCCATC ATCCCGCCGC TGGCCCTGGA CGGCCCCAGC CTGTCCATCC GCCGCTTTTC CAAGGACCCG CTGGAACTGG AAGACCTGAT CCGCTTCGGC GCGCTGACCC CGGAAATGGG CGAGGTGCTG CGCGGCATCG TCAAGGCGCG GCTGAACATC ATCGTTTCCG GCGGCACCGG CTCGGGCAAG ACCACCATGC TCAACTGCCT GTCGCGCTTC GTGCCGCACG ACGAACGCAT CGTGACCATC GAGGACGCGG CGGAACTGCA ACTGAAGCAG GACCACGTGG TGCGGCTGGA AACCCGGCCC GCCAACATCG AAGGCCACGG CCAGGTCACC GCGCGCGACC TGGTCAAGAA CTGCCTGCGC ATGCGGCCCG ACCGCATCAT CGTGGGCGAA GTGCGCAGCG GCGAGGTGCT GGACATGCTG CAGGCCATGA ACACCGGCCA CGACGGCTCG CTGACCACCA TCCACGCCAA CACCCCGCGC GACTGCCTGA TGCGCCTGGA AACCATGGTG GCCATGGCCG GGCTGAACAT CGGCACCCTG TCGCTGAAGC GGTACATCGC GTCCGCCGTG GACGTGATCA TCCAGGTTTC GCGCCTGGCC GACGGCTCGC GCAAGATGAC CAGCCTTTCG GAAATCACCG GCATGGAAGG CGACGCCATC ACCATGCAGG ACATCTTCAC CTTCGAACAG ACCGGCGTGG ACGAGAACGG CAAGGTGCAG GGGCGGTTCC GCTCCGGCGG CATCCGGCCC CGCTTCGCCC CGCGCCTGGC CGCCATGGGC ATCGAGCTTG GCGGCGCACT GTTCGATCCC GGCTTGTCGC AGTAA
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Protein sequence | MRLAERLMRT TRRQPAPALH LEPVASEDAR TGNAPHGTED DAQAHADVYG HLQLDPDGLD QNQGQDQGRG DGMPQAPRLG ASGLNARSHL SAVPPAATVG MAIQPDTARL DAPDEADTAP IPRVPVNDAT LFRAPRPESA PVSESATLAA PRADAPEAQP ADAQATQAGQ TGKSRPSARP AARPASAEQV CDVTTLTLHG DHYYEIRARL QDRLLEMMDL AAAESLPPDR LAAEISRLVE KLLREEFRQA PLNAQEQRQL VEDIRDEVMG LGPLEPLLRD PTVNDILVNN YRMVYVERRG KLIRVNTRFL DDDHLRKIID RIVARIGRRV DEASPMVDAR LADGSRVNAI IPPLALDGPS LSIRRFSKDP LELEDLIRFG ALTPEMGEVL RGIVKARLNI IVSGGTGSGK TTMLNCLSRF VPHDERIVTI EDAAELQLKQ DHVVRLETRP ANIEGHGQVT ARDLVKNCLR MRPDRIIVGE VRSGEVLDML QAMNTGHDGS LTTIHANTPR DCLMRLETMV AMAGLNIGTL SLKRYIASAV DVIIQVSRLA DGSRKMTSLS EITGMEGDAI TMQDIFTFEQ TGVDENGKVQ GRFRSGGIRP RFAPRLAAMG IELGGALFDP GLSQ
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