| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2683 |
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| Symbol | |
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| ID | 7174621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3391849 |
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| End bp | 3395925 |
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| Gene Length | 4077 bp |
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| Protein Length | 1358 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643541215 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002437090 |
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| Protein GI | 218887769 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.117306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCG AGCCACGCCC CGAATCCTCC CACCCTGGGT CGTCGCCGTC ACCCTCGCCC
ATGGTGTCCG ACACCCCGCC GGGTTTCGCG TCCGACGTAT TTTCTTCCGC CCCTCCCGCT
TCCCTGGCCT TTGTCGCATC GGCAAGGGGC ATGCTGCTTG CGCTGGTTCT GCCGCTGGGA
ACCCTGGCCC TGCAATGGAT GTTGTGGGAC TACATCCGGC CCTATGTGTG GTTCCTGTTC
TATCCTGCCG TGTTCCTGGC CTCTCTGGCG GGCGGGTTGG CGGGGGGCCT GATCGCCACC
CTGCTGTCGG CATTGCTGGT GCTGTACTTC TTCATCCCTC CCGTACTGTC CTTCATGGTG
GTGAAACCGG TGGATGTGGT CGCCGTGGCC ATGTTTCTGG GCATCGGGTT GATGATCAGC
CTGGCCCACC AGCGGGTGCG GGATGCCGTC CGTCGTGTTG TCGAGACACA GGAGAGGCAG
CAGGCCGAGC GGGTAGAGGC GGACGAGGCC ACCTCCCGGC TGCGCGCGAC CAATGCCGAA
CTTGCCGCCC GTTGCGCACG CGCCGAAGAA CTGGATGTCC TGAAGACCCG TTTTTTCGCG
AACATCAGCC ATGAACTGCG CACTCCGCTC ACCCTGCTGC TGGGGCCGCT GGAACGGCTG
CTGGCCGAAA CGTCCGAGGA CGACGAGCAC CGCCACTCGC TGTTCACCAT GCTGCGCAAC
GCCCGGTTGC TGCACCAGCA TGTGGACGAC ATGCTGGACC TTTCGCGAGT GGATGCCGGG
GCCATGCAAC CGCGCCATGC AGAGGCGGAC CTGTCCGCGC TGACGCGCAC CACCTGCGCC
TACTTCGATA CCCTGGCCGC CCAGCGCGGC ATGCACTACG GGGTGCAGGC GCCCCTGCGC
CTGGACGCGC AGGTGGACAC GGACAAGTAC CGTCGCATCC TGCTCAACCT GCTGTCCAAC
TCCTTCAAGT TCACCCCGGA CGGGGGCAGC GTTTCCGTGA CCCTGGAGCG CCAGGGCGAC
GAGGCGCTGC TTTCGGTGAG CGACGACGGC CCGGGCGTGC CCGCGCACCT GCGCGGCGCG
GTGTTCGAAC GATACCGCCA GAGCGGCGAG GGCGCGCGCG GACTGCACGG CGGCAGCGGT
CTCGGGCTGG CCATCGTCAA GGAATTTGCG GAACTGCACG GCGGAACGAC CAGCGTCGGG
CAGGGTGCCG AGGGCGGGGC GCTGTTCCAG GTGCGGCTGC CTCTGGCCGC GCCCCCCGGC
GTGGAGGTGG CCCCGGCGGA ATCCGTTGCC GGATCGGGCA GCTTTGCGGG CGATCCCGGC
TGGCTGGCCT CCGGCCATGT TCCGCAGTAT GCCCCGGCGG CGGGCAGGGA CGGCGGACTG
GTGCTGGTGG TGGAAGACAA CCGCGACATG ATCGCCTACA TCGTGGACAT CCTGCGACCG
CATCATCAGG TGGCCGTGGC CTTCGATGGC GAGGAGGGAC TGCGCAAGGC GCTGGACCTG
CGGCCCGACC TTATCGTGTG CGACGTGATG ATGCCCCGCG TGGACGGCCA GCGCATGGTG
GAACAACTGC GCCGCTACCC CGGCATGGCC GACGTGCCGG TGCTGATGCT GACCGCCAAG
GCCGACGACG AACTGCGCGT GCACCTGCTG CATGGCGCGG TGCAGGGGTA CATCCAGAAG
CCCTTTACGG CTGCGGGTCT GCTGGCCAGC GTGCACGCCG AACTGCGTGA CCGGGCCCGG
CACAAGGCAG AGCTTGACGA AAGCGAAACC CGGTTCCGCG CCACCTTCGA GCAGGCGGCG
ATGGGCCTTG CCCTGGTGGC CCCGGACGGA AGCTGGCTGC GCGTCAACGG CAAGCTGTGC
GCCATTGTGG GCTACTCTGC GGAAGAACTG ACGAAACTGC GCTTTCAGGA CATCACCCAT
CCCGAATACC TGGACAGCGA CCTGGCGCTG ATGCACCGGT TGCTGGCCGG CACCATAGAC
AACTACAGCC TGGAGAAGCA GTACCTGCGC AAGGGTGGCG AGCCGGTGTG GGTGAACCTG
ACCGTGGCCC TGGTGCGCAA GGCCGACGGC ACGCCCGACT ACTTCATCTC GGTGGTGGAG
GACATCCAGC AGCGCAAGAC CTTCGAACGG CGTTTGGCCG AAAGCGAGGA GCGTTTCCGT
CAGGTGGTGG AGCACGCCCC GGAGGCCATC TTTTTGCAGA AGGAAGGTAG GTTTGCCTAT
GCCAACCCGG CGGCGCGGGT GCTGTTTGGC GTGGATGACC CCAAGGAGAT CATGGGGCGG
GGCGTGCTGG AATTCTTCCA CCCCGACGAC CGAAGCATGG TAGTCGAACG CATCCGCCAA
CTGAACGAGG AGCGCCGCAC GGTACCGCGC GGGCATGTGC GCATCCAGCG CCGCGACGGC
ACCGTCGTGG ATGCGGAAAC GTCCGCCGTG CCCTTCCGGC TGGGGGGGCG CCACGGTGCG
CTGGTCTTTG TGCGCGACAT CAGCGACCGG CTGTGGGCGG AACGCGAGAT ACGCGACCTC
GCGCGCTTTC CCGGTGAAAA TCCCAACCCG GTCATGCGGG TCAGTCCGGC CCTGGTGCTG
CTGCACGCGA ACCGGTCCAG CGGTACGTTT CTCGAATGCT ACGGGGCGCG GGTGGGCTCC
CCCTTCCCCG CGCCGTTTGC CGAGGTGGTG GCCGAGTCCT TGCGCACATG GGCCCCACGT
ACCTTCGAGG CCCAATGCCT TGACCGCATC TACGCCATGA CCGTGAACCC CATTGCCGAC
GGCGGTTACG CCAACATCTA CGGCATGGAC ATCACCGAGC GGAAGAACGC GGAACTCGAA
CTGATCAACG CGCGCGAGGT GGCGGAAACC GCCACCAAGG CCAAGAGCGC CTTTCTGGCC
AACATGAGCC ACGAACTGCG CACCCCCATG AACGGCGTGC TGGGCATGCT GCAACTGCTG
GACGCCACCC CCCTGGACCC GGAGCAGCGC GGCTACGTGC AGGTGGCCCA CGCGGCGGGC
AGCAATCTGA CGCGCCTTCT GGGCGACCTG CTGGACCTGG CCAGGGTCGA GTCTGGGCGA
TTGACCATCC GCGAGGAACC GTTCGATTTC AACGGGCTGA CACAAGAGGT GCTGGCCGTG
CTGCGGCCAG AGGCGGACCG CAAGGGCATC GTGCTGGAGG CGGCGACGGA CGGCATGCCG
GGTGCCCTGC TGGGCGATCC GCAGCGCATC CGCCAGATGC TGCTGAACAT CGTGGGCAAT
GCCGTGAAGT TTACGGATAG GGGGCATGTG CGGCTGCTGG CCCGCTTCGA GCCGTCAGCC
GGGCCAAGCG CGACAGCCGA ACCCGGCGGG CAGGGCGAAC CCGGCGGGCA GGGCACGCTG
TACCTCGCGG TGGAAGATAC CGGCATCGGC ATCCCAAGCG ACATGCTGGG CAACATCTTC
GAGCCGTTCA CCCAGGTGGA GGACGCGGTG TCGCGCAGGC ACGGCGGGGC CGGTCTGGGG
TTGTCCATCG TGCGGCGCAT CGTGGACCTG ATGGAGGGCG AGGTCTCCAT GACCAGCGAG
GAGGGGCGCG GCACCACCGT GACGTTGCGC CTGCCCGTGG CCGCAATGGA CCGGCTGCCC
GCGCAGGAGC CGACGCGCAA CGGGCTGGCC GACCCGCCCG TGCGCCAGGG GCGCCTGCTG
CTGGTGGAGG ACGACCACGT GAACCGGCTG ACCGTGCTCT GGATGCTGGA GAAGCTGGGC
TACGACGCCC TTGCCGTGGG GGATGGCGCT GCGGCGCTGC AGGCGTTGCG GCAGGGGCGC
TTCGACGCGG TGCTCATGGA CGTGCAGATG CCGGTCATGG ACGGCCTGCA AGCCACGGCG
GCCATCCGCA ACGCCACGGA CCTGCCGGGC GGGGCGGAGG TTCCGGTCAT CGCCCTGACG
GCCTATGCCA TGGAAGGTGA CCGCGAGCGA CTGCTGGCGG CAGGCATGGA CGACTACGTC
GAAAAGCCGG TGGACGTGCA GGCGCTGCGC CGGGTGTTGT CCCGTTTCGT GGGCGAACCC
GATGCCCCGG CCCTTTCCGA TGCGTCCCGG CTGGCGGACG TGCCGGACAA TCCCTAG
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| Protein sequence | MSAEPRPESS HPGSSPSPSP MVSDTPPGFA SDVFSSAPPA SLAFVASARG MLLALVLPLG
TLALQWMLWD YIRPYVWFLF YPAVFLASLA GGLAGGLIAT LLSALLVLYF FIPPVLSFMV
VKPVDVVAVA MFLGIGLMIS LAHQRVRDAV RRVVETQERQ QAERVEADEA TSRLRATNAE
LAARCARAEE LDVLKTRFFA NISHELRTPL TLLLGPLERL LAETSEDDEH RHSLFTMLRN
ARLLHQHVDD MLDLSRVDAG AMQPRHAEAD LSALTRTTCA YFDTLAAQRG MHYGVQAPLR
LDAQVDTDKY RRILLNLLSN SFKFTPDGGS VSVTLERQGD EALLSVSDDG PGVPAHLRGA
VFERYRQSGE GARGLHGGSG LGLAIVKEFA ELHGGTTSVG QGAEGGALFQ VRLPLAAPPG
VEVAPAESVA GSGSFAGDPG WLASGHVPQY APAAGRDGGL VLVVEDNRDM IAYIVDILRP
HHQVAVAFDG EEGLRKALDL RPDLIVCDVM MPRVDGQRMV EQLRRYPGMA DVPVLMLTAK
ADDELRVHLL HGAVQGYIQK PFTAAGLLAS VHAELRDRAR HKAELDESET RFRATFEQAA
MGLALVAPDG SWLRVNGKLC AIVGYSAEEL TKLRFQDITH PEYLDSDLAL MHRLLAGTID
NYSLEKQYLR KGGEPVWVNL TVALVRKADG TPDYFISVVE DIQQRKTFER RLAESEERFR
QVVEHAPEAI FLQKEGRFAY ANPAARVLFG VDDPKEIMGR GVLEFFHPDD RSMVVERIRQ
LNEERRTVPR GHVRIQRRDG TVVDAETSAV PFRLGGRHGA LVFVRDISDR LWAEREIRDL
ARFPGENPNP VMRVSPALVL LHANRSSGTF LECYGARVGS PFPAPFAEVV AESLRTWAPR
TFEAQCLDRI YAMTVNPIAD GGYANIYGMD ITERKNAELE LINAREVAET ATKAKSAFLA
NMSHELRTPM NGVLGMLQLL DATPLDPEQR GYVQVAHAAG SNLTRLLGDL LDLARVESGR
LTIREEPFDF NGLTQEVLAV LRPEADRKGI VLEAATDGMP GALLGDPQRI RQMLLNIVGN
AVKFTDRGHV RLLARFEPSA GPSATAEPGG QGEPGGQGTL YLAVEDTGIG IPSDMLGNIF
EPFTQVEDAV SRRHGGAGLG LSIVRRIVDL MEGEVSMTSE EGRGTTVTLR LPVAAMDRLP
AQEPTRNGLA DPPVRQGRLL LVEDDHVNRL TVLWMLEKLG YDALAVGDGA AALQALRQGR
FDAVLMDVQM PVMDGLQATA AIRNATDLPG GAEVPVIALT AYAMEGDRER LLAAGMDDYV
EKPVDVQALR RVLSRFVGEP DAPALSDASR LADVPDNP
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