Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2550 |
Symbol | |
ID | 7174486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3223559 |
End bp | 3225616 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643541080 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_002436957 |
Protein GI | 218887636 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCAT CGATCCTGCT GGTGGACGAC GAGGAAGGCA TCCGCACCGT GCTCGGCATC TCGCTTGCCG ACGCGGGCTA CGACGTGACC ACCGCCGCCA GCGGCGAAGA AGCCCTTGCC CGCTTTGCCG CGCACAGGCC CGACATCGTG CTCACCGACA TCAAGATGCC CGGCCTGTCC GGGCTGGACC TGCTGGAGCG CCTGAAGGCC GCCGACCCGG AGGTGGAGGT CATCATGCTG ACCGGCCACG GCGACATGGA CCTGGCCATC CAGAGCCTGA AGCGCGACGC CACCGACTTT CTCACCAAGC CCGTCAACGA CGACATGCTG GAAGTGGCCC TGCGTCGCGC CGAGGAACGC ATATCCATGC GCCAGCGCCT GCGCGGGTAC ACCGAAAACC TGGAACAGAT GGTGCGCGAC CAGTCGGCCC GGCTGGTGGA GGCGGAACGC CAGCTGGCCG CGTTGCAGGT CATGGACGGC ATCGCCAGCG GCATCCGTTC GCTGTGCAGC GCGCTGGACG ACGGCGGGCT GTTCAACGAG CTGCCCTGCT TCGTGGCCGT GCACAACGCC GACCTCGAGA TCGTCTCCAC CAACCAGCTG TACAAGGAAC GCCTGGGGCA CCGCATCGGC AGCCGCAGCT GGGAGGCCTA CGCCGGGCGC GGCCCCGGCG ACCGGCTGTG CCCGGTGATG CGTGTGCTGG AGACGGGCGA GGGGTTCCGC TCCAACGAGG TGCTGCTGGG CAGGAACGGG CAGGAAATCC CGGTCATCGT GAACACCGCG CCCATCTACG GCAACGACGG CGAGGTGGAA CTGGTGCTGG AGCTTTCGGT GGACGTCTCC GAGGTGCGCC GCCTGCGCGA AGACCTGCGC CTGACCCGCG AACGGTTCCG CCAGTTGTTC GACGAATCGC CCTGCTACGT GGCCGTCATG GACCGCGACT TCGGCGTGGT GGAGGCCAAC CGCAGATACC GCGAGGATTT CGGCGACCCC ACGGGCCGCC GCTGCCACGA CGCCTTTGCC CACCGCCTGG CCCCCTGCTC CGGCTGCCCC GCCGGGCGCA CCTTTGACGA CGGGCGCCCC CATCAGGCGG AAACAGTGGT CACCGCGCGC GACGGGCGGC AGGTGAACGT GCTGGTGTGG ACGGCCCCCC TGCGCGACGC AGAGGGCGCC ATCACCGAGG TCATGGAGAT GTCCACGGAC ATCACCGAAC TGCGCCGCCT GCAGGACCGG CTTTCGCAAC TGGGGCTGCT GCTGGGCTCC ACGGCGCACG GCATCAAGGG GCTGCTCACC GCGCTGGACG GCGGGGTGTA CCGCCTGGGC AGCGGCATCG CGCGCGGCGA CGCGGCGCGG GTGCAGGACA GCCATCAGGA CATCCGCCAT CTGGTGGACC GGCTGCGCAA GATGGTGCTG GACCTTCTGT ACTACGCCAA GAACCGCGAA CTGAACTGGG AAGTGGTGGT CACCCGCGCC TTTGCCGAGG AAACGGCCAT GCTGGTGGAG GCCAAGGCCA CGGAACGCGG GGTGCGCTTT GTGCGGGATT TTGCGGGCAC GAGGGCCGAG GAAAGCGCCG AAACGGCGAC GGACGCCGGA GAGACCACGG GCACGGCTCA GACCGGATCA GCGGCAAGCG GCGGTACCGC CGACCTCGGC ACCTTCGAGG CGGACACCGG GGCGCTGTCG TCCGCGCTGG TGAACCTGCT GGAAAACGCC GTGGAAGCCT GCGCGGCGGA CGGGCGCAAG CAGGACCACG CCGTCACCTT CCGGGTGCGC GGCGCGCCGG AAGAGGTGAC CTTCACCATC ATCGACAACG GCACCGGCAT GGACCGCGAG ACCCGCGAAA AACTGTTCAC CCTGTTCTTC TCGTCCAAGG GCACCGCCGG GACGGGCATC GGCCTGTTCG TGGCCAGCCA GGTGGTGCGG CAACACGGCG GGCACATTGC CGTGGCATCC GAACCCGGCG AGGGCAGCAC CTTCACCGTG TCGCTGCCGC GCCGCCTGCC GGAGGCGGTA AGGCGTGGGG ATGGGGCGGA GGAAGAACGA ACGGAAAACG GCGGCTAG
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Protein sequence | MGASILLVDD EEGIRTVLGI SLADAGYDVT TAASGEEALA RFAAHRPDIV LTDIKMPGLS GLDLLERLKA ADPEVEVIML TGHGDMDLAI QSLKRDATDF LTKPVNDDML EVALRRAEER ISMRQRLRGY TENLEQMVRD QSARLVEAER QLAALQVMDG IASGIRSLCS ALDDGGLFNE LPCFVAVHNA DLEIVSTNQL YKERLGHRIG SRSWEAYAGR GPGDRLCPVM RVLETGEGFR SNEVLLGRNG QEIPVIVNTA PIYGNDGEVE LVLELSVDVS EVRRLREDLR LTRERFRQLF DESPCYVAVM DRDFGVVEAN RRYREDFGDP TGRRCHDAFA HRLAPCSGCP AGRTFDDGRP HQAETVVTAR DGRQVNVLVW TAPLRDAEGA ITEVMEMSTD ITELRRLQDR LSQLGLLLGS TAHGIKGLLT ALDGGVYRLG SGIARGDAAR VQDSHQDIRH LVDRLRKMVL DLLYYAKNRE LNWEVVVTRA FAEETAMLVE AKATERGVRF VRDFAGTRAE ESAETATDAG ETTGTAQTGS AASGGTADLG TFEADTGALS SALVNLLENA VEACAADGRK QDHAVTFRVR GAPEEVTFTI IDNGTGMDRE TREKLFTLFF SSKGTAGTGI GLFVASQVVR QHGGHIAVAS EPGEGSTFTV SLPRRLPEAV RRGDGAEEER TENGG
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