Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2450 |
Symbol | |
ID | 7174385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3084977 |
End bp | 3088279 |
Gene Length | 3303 bp |
Protein Length | 1100 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643540981 |
Product | ComEC/Rec2-related protein |
Protein accession | YP_002436859 |
Protein GI | 218887538 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 93 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCAGC CGTCCTCGCA GCCCCAGCCC CGACCGGAAC CGCCATTGGC GCCGCCACTG CTGCCGCCGC TGCTGTTCCG GCAGGCCTGC CTGCTGGCGG CGCTGGCCGG TCTGGCCGCG CTGCCGCCAC GGGGCGAACC CGTCTGGGCC GTCACGGCGG CGGCGCTGCT GTGGCTGGGC ATGGGCGCGC GGGCACGAGG GGCGGCGCGG GTGGCCGTAT ACGCGCTGTG CTTCTGCGTG GGGCTGGGGG CGGCATGGCT GCGTGAACCC GGACCGCCCC CGCCAACACC CGCCTGGGCC GACACCGACC GCCCGGTGCG CTTCAGCGGC ACGGTGGCCG AGTGCACCCC CACCACCGAC GGGCGCATCC GGCTGCTGCT GCGCGATGTG CGGCCAGAGA CGAACGCACG GCAGGCGAAC GGCGCTGGCG GACCTGCCGC GCCGGGCGGC TCCGCTGCAA CAGCGTCCGC AGCGGCATCG GGCGCGACAC CGGGCGCGAC ACCGGACGAC TCGCCGGGCG CACTGCTGCC CGCCACCGAA TCGCCCGCCC CAACGGAACC GATGGAGCAC CCGGCACTGC CGGGGCTGCT GGCCCTGTCA TGGCAAAGCC CGCCACTGCG GCCCGCGCCG GGCACCCGCC TGACCGTCAC CGCCGCCGTG GCCCCCATGC GCGGGCTGGC CAACCCCGGC GGCGACGACA GCGCGGCGTT CTGGGCCTCT CGCGATGTGC GTTTCCGCGC CTGGACCACC CACGCCAAGG GCGCGCCCCG CGTGCAAGGC ATACCGTCCG CAGGGTGGAC CTTCCGTGAA AACCTGCGCA CCGCCATGCT GCGGGCCATT GCCCTGCACG GCGCGCCGGA GAACGGCAGA TCGGACGCCG CAGCCGGGCC GGACGCCAAA AACGGCGACG CGACGACAGC CGCTGCCACG GAGACGCCCG CCAAAAAGGG CACCGGCGCA AAGCTCCGCC GCAAGGCCAC GACAGAGGCG TCCGAAGCGG GGGCGCCGGT ATCGGGGGGG CCCAGGCAGA AACCGTCGGG ACAGGGTGCG GCAGGACAGG AGCCATTCGG GCCGGGAGCG CCCTCAGCGG AATCCGCCGC TGTCGCCGCG CCCGGCCACG CCCCCGAACC GCCCACCCCG GCGGGGGCGT TTCTGCCCGC GCTGGTGCTG GGCGACCGCT TTCATCTGGA CAGCCGCGAC CTGGACCTTG TGGCCCGCGC CTCGCTGATC CACGCCATTG CCCTGTCGGG CATGCACCTG TGCGCCGCCG CCGCGCTGGG CGCCGCTGTC GCCCTGCTGG CCGGACGCAT GGCCCCCGGC GTGTACCTGC GCATTCCGCG CCGCAAGCTG GCCCTGGCCT GCTCGCTGCC GCCCGCGCTG GCCTATGTCT GGCTGGGCGG CGCGCCGCCC TCGCTGGTGC GCGCGGCGCT GATGCTGGTG TTCTGGGCGT GGCTGTACTG GCGGGGCAGG CCGCAGGTGC TGCTGGACGG CCTGCTGTGG GCGGTGTGCG TCATCGTGCT GTTCGACCCC GGCGCGGCGG ACGACCTGTC GTTGCAGCTT TCCGCCTGCG CCGTGGCGGG CATTGCCCTG GCCAGACCGC TGGCCGCCCT GCTGCCCCGC CGACTGCGTG AACTGGGTGA GCTGGGGGGG CTGGGGGGAG TGGGCGAACA GGATGGTCTG GCCGAACGGG GCGGTGCGGC CATCCACGAT GGATACGGCG GGCCTGCCGC AACGTCACCC GCGCACCGCA TGCACCGGCG CACCGCGCAC CCGTGGCGCT CCCGCCTCGT GGTGTACGCC GCGCGCACCC TGTGGGTGAC CCTGTGCATC CAGCTGATCC TGCTGCTCCT GTCCGCGCGG GTATTCGGCA CGTCCAGCCC GTGGTTCGCC CTGAACCTGC TGTTCCTGCC GCTCATCGAC GGCGTGGCGC TGCCGCTGGG CCTTGCGGGC ATGGCCATGG CCCCCGCGGC GCCGGAGGTG GCCGGATGGC TGCTGCTGGT GGCCCGCTGG CCGTTCGATC TGCTGCTGGT TTCGCTGCGC TGGCTGGACG GCGCGGGCCT GCTGGGCAGC CCCCAGTTGC TGCGCCCCCA CCCCGCCGCC ATGCTGGGGC TGTGGGTGCT GCTGGGCGCG GCGGTGCTGC ATGTATCGGA GCGGGTATCG GACCAGACAT CCGGGGGCGC GACCGGTCAG GCCGCAGGCT CCACACGCCG TCGCGCCGCC CTGCTGCTGG CAGCCGGGGC GCTGCTGATG CTGGGGCCTG TGTGGCCGCG CCTTGCCGCC GCCACGGACC CTGCCGTGCG GCTGGCCGTG CTGGACGTGG GGCAGGGGCA GTCCGTGGCG CTGGATTGGG GCGCTGGCCG CATGCTGGTG GATGGCGGGG GCACGGCCTC GCGCTCGTGG GACACCGGAC GCCGCGTGGT AGCCCCGGCG CTGACCGACA ACCGCCCGCC CCGGCTGGAC GCGGTGGTCT GGTCGCACCC GGACCGCGAC CATTTGCGGG GGCTTCTGTA CGTCATCGAC GCCTTTGCCG TGCGCCGGGT GGCGGGCAAC GGCGAACCGC CGCACGGCGA GGACGGCGCG CGTCTGACCG CCATCCTGCG CCATGCCGGA TATCACGAGG AACGCTGGCA TGCCGGGCAG CGCATTCCCC TTGCCGACGG ATTGGAACTG GAAGTGCTGC ACCCACCCCT GCCGGAGGCG GCTGGCCCCG CCTTTGACGG CAACGACGCC TCGCTGGTGC TGCGCCTGAC GGCGCGCGAC GACAACAATC GGCAGGACGG GCCGAATGGA CCGAATGGGC CGGATGGGCC GAATCGACCG GATGGACCGG ATGGACCGGA TGGATCAAAT GGACAAGGCG GGTCAAATGG GCAGGACGGA CGTGGTGCGA GGCGCGGCCT GGCGCTGATT CCCGGCGATG CGGGCGACCC GGCCATCCGC GCCCTGCTGG ATGCGGGCAC GGACCTTTCG GCGGAAGTGC TGGTGCTGCC CCACCACGGC GGCAGGCGCA AGCTGCTGCC GCAACTGCTG GACGCGGTGC GCCCCTCCGT GGCCCTGGCC AGCGCGGGCT ACCGCAACCG TTGGGGCTTT CCCGTGGCGG ACACCCGCGC CGCGCTGGCG GCCCGGAACA TCCCCCTGCT GGTCACGGTG GAATCGGGCC AGATACAGGC CTGTTGGGAT GCGAGGGGGG CGAAGGGAGC AGAAAAGATG CACGACATGG GCGGAACGCG CGTCTGGCCC GGCCCGGCCA CCGTCACCAC CGCCCGCAAC GGGGACGGCG GCGACGCCGA CGGCGGACAG TAG
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Protein sequence | MHQPSSQPQP RPEPPLAPPL LPPLLFRQAC LLAALAGLAA LPPRGEPVWA VTAAALLWLG MGARARGAAR VAVYALCFCV GLGAAWLREP GPPPPTPAWA DTDRPVRFSG TVAECTPTTD GRIRLLLRDV RPETNARQAN GAGGPAAPGG SAATASAAAS GATPGATPDD SPGALLPATE SPAPTEPMEH PALPGLLALS WQSPPLRPAP GTRLTVTAAV APMRGLANPG GDDSAAFWAS RDVRFRAWTT HAKGAPRVQG IPSAGWTFRE NLRTAMLRAI ALHGAPENGR SDAAAGPDAK NGDATTAAAT ETPAKKGTGA KLRRKATTEA SEAGAPVSGG PRQKPSGQGA AGQEPFGPGA PSAESAAVAA PGHAPEPPTP AGAFLPALVL GDRFHLDSRD LDLVARASLI HAIALSGMHL CAAAALGAAV ALLAGRMAPG VYLRIPRRKL ALACSLPPAL AYVWLGGAPP SLVRAALMLV FWAWLYWRGR PQVLLDGLLW AVCVIVLFDP GAADDLSLQL SACAVAGIAL ARPLAALLPR RLRELGELGG LGGVGEQDGL AERGGAAIHD GYGGPAATSP AHRMHRRTAH PWRSRLVVYA ARTLWVTLCI QLILLLLSAR VFGTSSPWFA LNLLFLPLID GVALPLGLAG MAMAPAAPEV AGWLLLVARW PFDLLLVSLR WLDGAGLLGS PQLLRPHPAA MLGLWVLLGA AVLHVSERVS DQTSGGATGQ AAGSTRRRAA LLLAAGALLM LGPVWPRLAA ATDPAVRLAV LDVGQGQSVA LDWGAGRMLV DGGGTASRSW DTGRRVVAPA LTDNRPPRLD AVVWSHPDRD HLRGLLYVID AFAVRRVAGN GEPPHGEDGA RLTAILRHAG YHEERWHAGQ RIPLADGLEL EVLHPPLPEA AGPAFDGNDA SLVLRLTARD DNNRQDGPNG PNGPDGPNRP DGPDGPDGSN GQGGSNGQDG RGARRGLALI PGDAGDPAIR ALLDAGTDLS AEVLVLPHHG GRRKLLPQLL DAVRPSVALA SAGYRNRWGF PVADTRAALA ARNIPLLVTV ESGQIQACWD ARGAKGAEKM HDMGGTRVWP GPATVTTARN GDGGDADGGQ
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