Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2442 |
Symbol | |
ID | 7174376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 3075945 |
End bp | 3076682 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643540972 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_002436851 |
Protein GI | 218887530 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 98 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTCCG GTATCCCGCC CGGCATGCCG GGTGTGACAC AGGGTGCGTA TCCTGCCGAT GCGCGTGCGG TGCCCGTTGT GGTGCCGCCA GCGGCGGGGG CCATCCTGCA CGGCCCGAAC GGGGCCATTT CCCGTGCGGA CGGGTTCATT TCCGGTGCGG ATGCGGGTGA TGGCCCGGTG GACCTTGTGA CCGCGCAACC CGTGCCGCAC CCCGTCGCTT TTCTGCCCCC TGCCGGGCAC CCCCCTTCGG AAAATTTGCT GGACCGCATG GACGTCTACG CCCTGTCGCC GGATGCGGCC AAGCTGGCCC TGCCCCGCAT GGTGCCGCTG GTGATGGTGG AGCGGGTGCG CGCAGGCAGG CTGCCCATGC CCGCCTGGGA CGGAATCATC GCGCGGGCCA GCCGCCTGAG CGGGCTGGAA GAGCGTCTCA TTGCCGCCGT GGTCCGGGCG GAGTCGGGGT TCAACGTGGG GGCCGTGTCC CCCAAGGGGG CGCGGGGGCC CATGCAGATC ATGCCCGCCA CCGGACAGGA ACTGGGGCTG GATGATCCCT TCGATCCGCA GGCCAACGTG GAGGCGGGCA GCCGCTACCT GCGCCAGCAA CTGGACCGCT TTGGCTCGCT GGAACTGGCC CTTGCCGCGT ACAACGCGGG CCCCGGCAAC GTGGAACGCT TCGGCGGGGT GCCGCCGTTT GCCGAAACCA GGGCGTTCGT GAACAGGGTG TTGTCCGGGC TGGATTGA
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Protein sequence | MESGIPPGMP GVTQGAYPAD ARAVPVVVPP AAGAILHGPN GAISRADGFI SGADAGDGPV DLVTAQPVPH PVAFLPPAGH PPSENLLDRM DVYALSPDAA KLALPRMVPL VMVERVRAGR LPMPAWDGII ARASRLSGLE ERLIAAVVRA ESGFNVGAVS PKGARGPMQI MPATGQELGL DDPFDPQANV EAGSRYLRQQ LDRFGSLELA LAAYNAGPGN VERFGGVPPF AETRAFVNRV LSGLD
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