Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2434 |
Symbol | |
ID | 7174368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 3069549 |
End bp | 3070166 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643540964 |
Product | type III secretion system protein |
Protein accession | YP_002436843 |
Protein GI | 218887522 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | [TIGR02499] type III secretion apparatus protein, HrpE/YscL family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 89 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCCC TGTTTCGACT GAATGCCAAC GCCGTGACCC CGGCACCCGG CCAGCGCGTG CTGAAGGCCG CCGACGCGGC CCTGCTGCGC GAGGCGCAGG ACATCCTGGA AGCCGCCCGC GCGCGCGCCG CCGAACTGGA ACTGGCGGCG CGGCAGGCCT ACGACCGCCG GGTGGAGGAA GGCTACCGCG ACGGGCTGGA GCAGGGGCGG CTGGAACATG CCGAAAAACT GCTGGAAACG ATCATGTCGT CGGTGGAATT CATCGAGGGC ATCGAGGCCA CCGTGGTCCG CGTGGTGACG GAGGCGGTGC GCAAGGTCAT CGGAGACCTT GGCGACGACG AGCGCATCGT GCGCATCGTG CGCACCGCGC TGGTGGCCGT GCGCAGCCAG CAGCGGGTGG TGGTGCGCGT GGCCCCGGCG GACGAGCGCG CCGTGACCGA AGCACTTGGG GCCATGCTGC AATCCGCGCC CGGCTCCGCC AGCTTTCTCG ACGTGGTGGC CGACCCCCGC CTGGAGCGCG GGGCCTGCCT GCTGGAAAGC GAACTGGGCG TGGTGGACGC CAGCCTGGAA ACCCAGCTGA AGGCCCTGGA GAACGCATTT CATGCCAAGA TCCGCTAA
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Protein sequence | MGALFRLNAN AVTPAPGQRV LKAADAALLR EAQDILEAAR ARAAELELAA RQAYDRRVEE GYRDGLEQGR LEHAEKLLET IMSSVEFIEG IEATVVRVVT EAVRKVIGDL GDDERIVRIV RTALVAVRSQ QRVVVRVAPA DERAVTEALG AMLQSAPGSA SFLDVVADPR LERGACLLES ELGVVDASLE TQLKALENAF HAKIR
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