Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2415 |
Symbol | |
ID | 7174349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3053406 |
End bp | 3055496 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643540945 |
Product | type III secretion protein, HrcV family |
Protein accession | YP_002436824 |
Protein GI | 218887503 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4789] Type III secretory pathway, component EscV |
TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCCC GCGCCAACAC CGCCGTGAAT GCCGTTACCC GGCACAACGA CCTGGCCATC GTCGCCCTGC TGGTGGTGGT GGTTGCGCTG ATGATCCTGC CGTTGCCCAC CCCGCTGGTG GACACGCTGA TCGGCGCCAA CATGGCCCTT TCTTTCGTCA TGCTGATGAT GTCCATGTAC GTGCGCAGCG TGCTGGACTT TTCGGTGTTT CCCACCATGC TGCTGTTCAC CACGCTGTTC CGCGTGGGGC TGAACATCAC CACCACCCGG CTCATCCTGC TGCAGGCCGA CGCGGGCGAA ATCATCTTCG TGTTCGGCGA ATACGCGCTT GGCGGCAACT TCGTGGTGGG CGCGGTGGTC TTCGTCATCC TGACCATCGT GCAGTTCCTG GTCATCGCCA AGGGCGCCGA GCGCGTGGCC GAAGTGGGCG CGCGCTTCAC CCTGGACGCC ATGCCCGGCA AGCAGATGTC CATCGACGCG GACATGCGCG CGGGCGTCAT CGACATGGAG GAAGCCCAGC GCCGCCGCAA CATGGTGTCG CAGGAAAGCC AGATGTACGG CGCCATGGAC GGCGCCATGA AGTTCGTCAA GGGCGACAGC ATCGCCGGCA TGATCGTGGC CGTGGTCAAC ATCGTGGGCG GCACGGTCAT CGGCATCACC CAGCATGGCA TGACCGGGGC CGACGCCCTG CACACCTACG GCATCCTGAC CATCGGCGAC GGCCTGGTCT CGCAGATACC CTCGCTGCTG GTGTCCATTT CGGCGGGCAT CCTGATCACC CGCACGGGCG ATTCGGGCGG CAACGTGGGG GCGCAGATCG GCGGTCAGAT CTTCGGCCAG CCAAAGGCGC TGCTGATGGC GGGCGGGCTG GTGTTCCTGT TCGCGCTGGT GCCGGGCTTT CCCAAGCCGC AGCTGTTCGG GCTGGCCCTT GCCATCGGCG GGTTCGGCTA CGTGCTGCAA CGCATGGCCG AGGCCCCCGT GGCCGCCGAC CCCAGGGCGG AACTGAGCCG TTCGCTGGCC CCGGCCGCAC GACCCCGCAC GCCGCGCCCC GGCGCGGCGC AGCCCGGCGA CGATTTCGCC CCCACCGTGC CCATCATCCT GGACCTTTCG GCGGAACTGG GCGAGGCCCT GCACTACGAT GCCCTGAACG AGGAGCTGAT CAACCTGCGC CGGGCGTTGT ACTTCGACCT CGGCGTGCCG TTCCCGGGCA TCAACATCCG GCCCAGTCCC GGTCTGGAAG GGCTTTCCTA CGTACTGAAC CTGAACGAAA TCCCCATGTC GCGCGGCACG CTGGAACGAG GCATGTCCCT GGCCCGCGAC ACCAGCGAAA ACCTGGCCAT GCTGGGCGTC AACGCAAGGA CGGGCGAACG CTTCCTGCCC GACGTGGACC CCCTGTGGGT GCCCGACGAG CAGCTGCACC TGCTGGACAA GGCGGGCATA GGGCACATGA GCCACGCGCG CATCCTGGCC TACCACCTGT CGCTGGTGCT TTCGCGCCAC GCCAGCAACT TCCTGGGCAT GCAGGAGGCC AAGTACCTGC TCGACCGCAT GGAAGAACGC GCGCCCGACC TGGTGCGCGA GGCAACGCGC CTGCTGCCGG TGCAGCGCAT CGCGGAAATC TTCCAGCGCC TGGTGCAGGA ACAGATTTCC ATCCGCGACC TGCGCAACAT CCTGGAAGCG CTCATCGAAT GGAGCCCCAA GGAAAAGGAC ACGGTCATGC TGACCGAGTA CGTCCGCGGC GCGCTGAAGC GGCAGATAAG CTACATGCAT TCGCGCGGGC AGAACATGCT GCCCGCCATC CTGCTGGACC CGCAGGTGGA GGAAACCATC CGCAAGGCCA TCCGCCAGAC CTCGGCGGGG GCGTTCCTGG CGCTGGAGCC TTCGGTGACC GAGCGGTTCA TGAAGGCCGT GGGCGATGCC GCCGGGCGCT ACGCAAGCCA CGCCCAGAAA CCGGTGATCA TGACCTCCAT GGACATCCGG CGCTACGTGC GCAGGCTGAT AGAGGGCGAC CACTACGGGC TGGCGGTGAT CTCGTACCAG GAACTGACGC CCGAAATATC GGTGCAGCCG GTCAACCGCA TCCGGCTGTA G
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Protein sequence | MLARANTAVN AVTRHNDLAI VALLVVVVAL MILPLPTPLV DTLIGANMAL SFVMLMMSMY VRSVLDFSVF PTMLLFTTLF RVGLNITTTR LILLQADAGE IIFVFGEYAL GGNFVVGAVV FVILTIVQFL VIAKGAERVA EVGARFTLDA MPGKQMSIDA DMRAGVIDME EAQRRRNMVS QESQMYGAMD GAMKFVKGDS IAGMIVAVVN IVGGTVIGIT QHGMTGADAL HTYGILTIGD GLVSQIPSLL VSISAGILIT RTGDSGGNVG AQIGGQIFGQ PKALLMAGGL VFLFALVPGF PKPQLFGLAL AIGGFGYVLQ RMAEAPVAAD PRAELSRSLA PAARPRTPRP GAAQPGDDFA PTVPIILDLS AELGEALHYD ALNEELINLR RALYFDLGVP FPGINIRPSP GLEGLSYVLN LNEIPMSRGT LERGMSLARD TSENLAMLGV NARTGERFLP DVDPLWVPDE QLHLLDKAGI GHMSHARILA YHLSLVLSRH ASNFLGMQEA KYLLDRMEER APDLVREATR LLPVQRIAEI FQRLVQEQIS IRDLRNILEA LIEWSPKEKD TVMLTEYVRG ALKRQISYMH SRGQNMLPAI LLDPQVEETI RKAIRQTSAG AFLALEPSVT ERFMKAVGDA AGRYASHAQK PVIMTSMDIR RYVRRLIEGD HYGLAVISYQ ELTPEISVQP VNRIRL
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