Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2411 |
Symbol | |
ID | 7174345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3049838 |
End bp | 3051172 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643540941 |
Product | sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_002436820 |
Protein GI | 218887499 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA ATGAACTGCT CGACGTGCTC ATAGACCTGT GCGACGACCT CGCCTGGGCG CGTCCCGCCA GCGAGGACAG GCTGTTCGCC CTCACCGCCG CCGGTTCCGC CCCGGCCAGC ACCACCCGCC TCGCCGAGGC CTTCGGGATG ATGCTGGTCA AGGTGGAGGC GCGCGAATAC CAGCAGGCAC AGCTCATCGA GGAACTGAAG GCCCGCAACG CGGAGCTGGA AGAAGCCCGC CGCCTGCTCA CAGAGCGCAA CGCGCGCCTC ACCCACACCT TGCAGGAAAG CTTTCAGGCC CGGCGGGTCA TCGGGCAGTG CCCGGCCATG CGCCAGCTGA TCGAGATGGC CCTGTCCATC GCCCGGCGGC CCATCAACAC CCTGCTGCTG GGCCCCACCG GCGCGGGCAA GGAAGTGGTG GCCAAGCTCA TCCACTACAA TTCGCCGCGC CGCGAAGGGC CGTTCATCGC CGTGAACTGC ACGGCCATTC CCGAGGCGCT GTTCGAAAGC GAGATGTTCG GCATCGAAAA GGGCGTGGCC ACCGGAGTGG GCGCGCGCAA GGGGCTGGTG GAGGAAGCAG ACGGCGGCAC CCTGTTCCTT GACGAACTGG CCGACATGCC CCTGCCCCAC CAGGCCAAGC TGCTGCGGGT GCTGGAAGAG CGCGAGGTGC AGCGCGTGGG CAGCAACAAG GCGGTGCCGG TGGACCTGAA GGTCATCGCC GCCACCAACG TGGACCTGCA ACGCGCCGTG CGCGAAGGAA AATTTCGCGA AGACCTGTAC TACCGCATCA ACGTGGCGGA AGTGCACCTG CCCCCCCTGC GCGAACGGGG CGACGACATC CTGCTGCTGG CGCAGGCCTT TCTGGACCGG CACTGCACGC TGATGGGCAG GCCCCGGCTG TCCCTTTCGT ACGGCGCGCG CGACCGGCTG CTGCGCTATC CGTGGCCTGG CAACGTGCGC GAACTGAACA ACGAGATGGA GCGCGCCGCC GCCCTCACCC TGGGCGACCG GGTGGAGGCC GCCAACCTTT CGCCACGCCT GCTGGCCGCC ACGCCGGGCG CGGGCGAACC CGACGCCGCC GGGCAAGACA GCCCGGGCAC GGAAGACGCG TTCACCAAGC CCGCCACGCC CCTGCCCGGA GCGGGGGCCG CCACGCCCCC CCCGGACGAC AGCCTGAACC TGCAAGACAT GGAGCGCGAC TTGGTCATCC GCGCACTGGA CCGCACCGGC GGCAACAAGA GCCGCGCCGC CGAGCTGCTG GGCATCACCC GCGAAGGGCT GCGCAAGAAA CTGCTGCGTC TCGGCATTGC CGACGGCGGC CAGAACGGGC TTTAG
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Protein sequence | MSQNELLDVL IDLCDDLAWA RPASEDRLFA LTAAGSAPAS TTRLAEAFGM MLVKVEAREY QQAQLIEELK ARNAELEEAR RLLTERNARL THTLQESFQA RRVIGQCPAM RQLIEMALSI ARRPINTLLL GPTGAGKEVV AKLIHYNSPR REGPFIAVNC TAIPEALFES EMFGIEKGVA TGVGARKGLV EEADGGTLFL DELADMPLPH QAKLLRVLEE REVQRVGSNK AVPVDLKVIA ATNVDLQRAV REGKFREDLY YRINVAEVHL PPLRERGDDI LLLAQAFLDR HCTLMGRPRL SLSYGARDRL LRYPWPGNVR ELNNEMERAA ALTLGDRVEA ANLSPRLLAA TPGAGEPDAA GQDSPGTEDA FTKPATPLPG AGAATPPPDD SLNLQDMERD LVIRALDRTG GNKSRAAELL GITREGLRKK LLRLGIADGG QNGL
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