Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2401 |
Symbol | |
ID | 7174335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3034090 |
End bp | 3035031 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643540931 |
Product | nickel transporter permease NikB |
Protein accession | YP_002436810 |
Protein GI | 218887489 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | [TIGR02789] nickel ABC transporter, permease subunit NikB |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 90 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCCT ACATACTGAA ACGCCTTGCC GCCCTCATCC CCCTGCTGCT GCTGGTCTCG GTGGTGGTCT TCCTGCTGCT GCGCGCCGCC CAGGGCGACC CGGCCATGGC CTACCTGCGC CTGTCGCGCA TCCCCCCCAC TGACGAGGCC CTGGCCACCG CCCGCCGCAT GCTGGAGCTG GACCTGCCCC TGTGGGAACA GTACGCCCGC TGGCTGGCCC GCGCCGTCAC CGGCGACTTC GGCAACTCCT ACGTCACGGG CCGCCCGGTG CTGGGCGAGG TGCTGCACTA CCTGCCCGCC ACCCTGCAAC TGGCCGGGGC GGCCCTGCTG CTCACCCTGA TCGTCAGCAT CCCCCTGGGG GTCGGCGCGG CCCTGCACCG CGACCGCCCG CTGGACAACG CGGCCCGCGC CCTGTCCTTC ACCAGCGTGT CCCTGCCCAA CTTCTGGCTG GGCTTCCTGC TGGTGTGGCT GTTCGCGGTC AAGCTGGGCT GGCTGCCCGC GCTGGGGCGC GGCGGCCTGG AACACCTGGT GCTGCCCGCC GTGACCCTGT CGCTGATGTC CATGGGCATC AACACCCGGC TCATCCGCGC CAGCCTGCTG GAAAACATGC ACGCCCGGCA CATCATGTAT GCGCGGGCGC GCGGCATTTC CGAACGCGGC GTGGTGTGGC GGCACATGTT CAAGAACTCG CTGATCCCGG TGCTGACCTC GCTCGGCATG CACGTGGGCG AACTGCTGGG CGGCGCGGTG ATAGTGGAAA CGGTGTTCGC CTGGCCGGGC GTGGGCCGCT ACGCGGTGTC CGCCGTGTAC AACCGCGACT ATCCCATCCT GCAATGCTTC ATGCTGCTGA TGACGGCCAT CTTCGTGCTG TGCAACCTGG CCGTGGACAT CCTGTACGCG TGGGCCGACC CGCGCATCCG GCTGGGGGAG GACCGCGCAT GA
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Protein sequence | MPAYILKRLA ALIPLLLLVS VVVFLLLRAA QGDPAMAYLR LSRIPPTDEA LATARRMLEL DLPLWEQYAR WLARAVTGDF GNSYVTGRPV LGEVLHYLPA TLQLAGAALL LTLIVSIPLG VGAALHRDRP LDNAARALSF TSVSLPNFWL GFLLVWLFAV KLGWLPALGR GGLEHLVLPA VTLSLMSMGI NTRLIRASLL ENMHARHIMY ARARGISERG VVWRHMFKNS LIPVLTSLGM HVGELLGGAV IVETVFAWPG VGRYAVSAVY NRDYPILQCF MLLMTAIFVL CNLAVDILYA WADPRIRLGE DRA
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