Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2360 |
Symbol | |
ID | 7174294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 2980896 |
End bp | 2982236 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643540890 |
Product | Tol-Pal system beta propeller repeat protein TolB |
Protein accession | YP_002436769 |
Protein GI | 218887448 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 0.28939 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACAGC ATCATGCCAT CCACCGCCTT ATGGCGGCAG TGTGCCTCAT CGCGTGCTGC GCGCTGGCGG CCCCGGCCCT TGCGGTCGGC CCCGTGCAGA TCGACATCTA CGGCCCCGGC CAGGGCAGCC TGAACCTTGC CCTTGCCGAT CCGCTGGGCC CCACCCCCGG CACCCCGGTG ACCGGGCAGG GCGTGAAGCT GAACGAAATC ATCCGCGAGA ACCTGAGCTT TCTGCCGTTC CTGCGCCTGA CCGACCCCAA GGCCATCCTG GGCGGTTCGG TGCTGCAAAG CTACAAGGCT CCGGACATCG ACTTCAAGCG CTTCCAGATC GCGGGCACCG ACCTTGTGGT CACCGCGGGC TGGCCCCAGG GCGACGCCCC CGGCAAGCCC TTCGTCGAAC TGCGCGTGTA CGAGGCGTAT TCCGGCAAGC TGGTGTTCGG CAAAGGCTAC TACGACATCC AGGAAACCCA GCTGCCCGAC GTGGCCGACC GCTTCTGCTC CGACCTCATG AAGGCCCTGA CGGGCCGGGG CGAGTTCTTC AAGTCCACCC TGGCCTTCGT GAAATCGGGC GGCAAGAACA AGAAGGACGT GTGGCTCAGC AAGCCCACCG GCCGCGACCT GCGCCAGATC ACCAACCTGC CCGGCGAGGC CATGTCCCCG TCGTGGTCGC CCGACGCGCG ATTCATCGTG TTCAGCCACA TGGACGACCG CACCCACGCC CTTGGCGTGT GGGACCGCCT GACCCGCCAG ACCCAGCGCA TCAAGTTTCC GGGCAACACC GTCATCGGCC CCACCTTCAT GCCCGACAAC AAGGTGGCGG TCAGCCTTTC CACCGGCAAG AACCCCGGCA TCTTCCTGCT GAGCCACGTG TTCCAGAAGG AACGCGCGCT TGAGGACAGC GCCTCCATCG ACGTTTCGCC CTCGTTCGAC GCCACCGGCA CCAAGATGGC CTTCTGCTCC AGCCGCCTGG GCGGTCCGCA GATCTTCCTG AAGGACCTGA CCACCGGCCA GGTGACGCGC ATCAGCCGCA GCGGCAACTA CAACACCGCC CCGTCCATCA GCCCCGACGG CACGCTGATC GCCTTTGCCC GCATGACCGA CTTTGGCCAC CGCATCTTCG TGTACGACAT GGTCACGCAG TCGGAGCGGC AGGTAACCTT CGGCCCCGGC ACCGACGAAA CCCCGTCCTT CGCGCCCGAC AGCTACTTTC TGGCGTTCAC CTCCACCCGC AGCGGCGCCA AGCAGATCTA CCTGATCACC CGGCACGGCG GCGACGCCAA GCGGGTGCCC ACGGGCGCCG GTGACGCCTC GTTCCCGGAC TGGGGCATGA TCCCCGACTA G
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Protein sequence | MRQHHAIHRL MAAVCLIACC ALAAPALAVG PVQIDIYGPG QGSLNLALAD PLGPTPGTPV TGQGVKLNEI IRENLSFLPF LRLTDPKAIL GGSVLQSYKA PDIDFKRFQI AGTDLVVTAG WPQGDAPGKP FVELRVYEAY SGKLVFGKGY YDIQETQLPD VADRFCSDLM KALTGRGEFF KSTLAFVKSG GKNKKDVWLS KPTGRDLRQI TNLPGEAMSP SWSPDARFIV FSHMDDRTHA LGVWDRLTRQ TQRIKFPGNT VIGPTFMPDN KVAVSLSTGK NPGIFLLSHV FQKERALEDS ASIDVSPSFD ATGTKMAFCS SRLGGPQIFL KDLTTGQVTR ISRSGNYNTA PSISPDGTLI AFARMTDFGH RIFVYDMVTQ SERQVTFGPG TDETPSFAPD SYFLAFTSTR SGAKQIYLIT RHGGDAKRVP TGAGDASFPD WGMIPD
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