| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2298 |
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| Symbol | |
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| ID | 7174231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2886064 |
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| End bp | 2887641 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643540828 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002436708 |
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| Protein GI | 218887387 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTGG CGAGGGAACG GACTCCATTG CCCGTGCTGG CCGGGCAGGC CGTTTCGCAG
GGGGTGGCCC TGCTGGCTGC GGGGCTGCTT GTGACCGCGC TGTCGTGTCT TGCCGCGCCC
CCCGCGCTTG CGCGTGACGC GGATCCCGCC CGTGAGCGCG GCGCGGCGTG CACGCCGTGT
GCCGCGTCGC GGCCTCGCCA TCCGGAATCC GCACAGTCCC CGTCCCGGCC TCTGGAGCTT
GCGCAATGCA TTGCCCTGGC CCTGCGCAAC AACGCGGCAC CCGCCGCCGC GCGCGAGGGG
CTGGCCATCG CGGAAGCCCA GCATCGCCAA GCCCTTTCGG CCTACTGGCC GCAGCTTGCC
GCAACGTACA CCCAGACCCG CCTGGACCGC GATCCGGCCT TCGTCTACCC GGAAGACTCC
TTCAACTATA CGGTGGACAT GGGCGGCGGT CCCATGACCA TGCGCACCAC CGTGCCCGAG
CGGCGCATCC GCCTTGCCGA CCGCGACATC GGTGAATTCC GGGCCGATCT CGGACTGTTG
CTGTACGACG GGGGCCGCCG CGAGGCCCGC GTGCGCGAGG CCGTGGCAGG CCGCGATGCC
GCCGTCGGCG AAGCGCGCCT GACAAGCCTG CAACTGGTGC ACGACGTGAC CACCCGCTAC
TACGGCGTTG TCCTGGCGCG GGCGTTGCGC GACATCGGGC GCGAAACCGT GCAGCGGTTC
GAAGCCACCC GCGAGGTGGC CGAGCATTTT TATCGCGGCG GTTCGCAGCG GGTGCGCAAG
ACCGACTGGC TGCGCGCCCG GGTAGCCGTT TCCGGCATGA AGGCGCGTTT GGCAGAACTG
GATTCCAACG TGGAACTGGC GGAATCCGCC CTGGCCAACA CGCTGGGCCT GGCGTGGGAC
GACCGGGTGC GGGTGGCGGA CACGGAACTG CCCGCCGCGC CTGCCCCCGG CGACCTGGAT
GGTGCCGTGG CCGACGCCTA CCGCCTGAAT CTGGACCTTG CCCGCTTCGA CGCGGGGGCC
CGCGCGGCAG AGGCCGGTCT GGACGATGCG ACCGGTGAAT ACCTGCCGGT GGTTTCGTTG
TTCGGCACCC TGTCCACGGT GACCAACTCC TACGATGGCG GCCTGGTGGG CGAGGGCGAA
CGCACCCGCG GCGCGGCGGG GCTGACCGTG GAATTGCCGC TGTTCGAAGG CTTTCGCACC
CGGGCGCGGG TGGAGGAGAT GCGCGCCCGC CTGCGCCAGT TGGCCCACCA GCGGGTGCTG
CTGCGCGAAG GCGTGGCCCT GCGCGTGAAG GATGCCGTGC TGCAAGAGCG CCGTGCGGCC
CGACAGGCGG ACATCGGTGC CGAAACCGTG GCCGTGGCCG GGGAAAGCCG CGCCCTGACG
GAACGCGCCT ACCGGGAAGG CCTTGTGGAT ACCCGCGAAC TGCTTGAAGC CCAGATTTAC
GAATCCATGG TGCGCGCGGC CCGGCTGCGC GCCCTGTACG AGGCGCAGGC CGCGGCCGCC
GCGCGCAATC TGGTGGCGGG CACCGAGATT CTCGAGCACC TGCGGGAGGT GGGCTATGGC
GCCCGTGCGC TGCCCTGA
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| Protein sequence | MAVARERTPL PVLAGQAVSQ GVALLAAGLL VTALSCLAAP PALARDADPA RERGAACTPC
AASRPRHPES AQSPSRPLEL AQCIALALRN NAAPAAAREG LAIAEAQHRQ ALSAYWPQLA
ATYTQTRLDR DPAFVYPEDS FNYTVDMGGG PMTMRTTVPE RRIRLADRDI GEFRADLGLL
LYDGGRREAR VREAVAGRDA AVGEARLTSL QLVHDVTTRY YGVVLARALR DIGRETVQRF
EATREVAEHF YRGGSQRVRK TDWLRARVAV SGMKARLAEL DSNVELAESA LANTLGLAWD
DRVRVADTEL PAAPAPGDLD GAVADAYRLN LDLARFDAGA RAAEAGLDDA TGEYLPVVSL
FGTLSTVTNS YDGGLVGEGE RTRGAAGLTV ELPLFEGFRT RARVEEMRAR LRQLAHQRVL
LREGVALRVK DAVLQERRAA RQADIGAETV AVAGESRALT ERAYREGLVD TRELLEAQIY
ESMVRAARLR ALYEAQAAAA ARNLVAGTEI LEHLREVGYG ARALP
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