| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2249 |
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| Symbol | |
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| ID | 7174182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2824044 |
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| End bp | 2826359 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643540780 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_002436660 |
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| Protein GI | 218887339 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA CCACCGCCAG CAAAGGAATC TCCGTCCCGG ACATCATCAA GGGGCGTTCG
CTGTCGCGCG ACCTCACCGT GAGCCTCGTG GTGATGGTGC TGGTGGTGGT GGCGGCGCTG
TTCTCGTTCG TCTACGTGCA GATTTCGCGC GACATGCTGC ACGAGGTGGA CCGCAAGGCC
GACGAATACA TCACCCGCCT GGCCGACATC CTGTCCATTC CCATGTGGAA CTTCGATGCG
CGCACCATGG ACCAGATCGG TTCGGTGTTC GCGCAGTACG AACTGATCAA CGAAATCCAC
ATCGAGGACG CCCAGGGCAA TACCCTGTTC CGGGTGCGCA AGGGCGCGGA CCCCGACGCC
ACCGTGTTTC GCGAACGGGC CGTACGCTTC GAGTCGGAAG TCATCGGCCG GGTGTCCATG
GTGGTCACCC TGCAGGAGTA CCGGCGCAGC CTGGAGCGGT TGCTGAAGGC CAGCGCCCTT
ATCATGGGCA GCGTGCTGGT GGTGCTGCTG GCTTCCACCG GGGTGCTGCT GCGCGTGTTT
CTGCGCCGCC CGCTGGAGGC GCTGCGATCC GGCATGGACC AGATAGCCAG GGGCGATTTT
GCCTACGACA TGGGGTCCAT CGCCCATGCC GAACTGGCCC AGATCGCAGA GAATTTTTCG
CGCATGTGCA GCCAGGTCGA GCAGCGCGAA AACGAACTGC ACGCCATCAA CACCAAGTTG
CAGGACGAGA TACAAAGCCG CCGCCAGACA GAACTGGCCC TGCGCGCCAG CGAGGAACGC
TACGCCCTGG TGGTGGGCGG CACCAGCGAC GGCATCTGGG ACTGGGATCT CACCACCAAC
ACCGTCTATT TTTCGCCGCG CTGGAAATCC ATCATCGGCT ACGAAGATCA CGAGATCCCC
AACCGGCCGG ACGAGTGGAA GGGGCGGGTG CACCCCGACG ACCTGGATGC CGTGCTGCAC
GCCCACGACG ACTACCTTGC CCGCCGCGTG CCCGAGTTTC AGGTGGAATA CCGCATGCGC
CACAAGGACG ACAGCTACCG CTGGATCCTG GGGCGCGGCG CGGCCCTGTG GGACGTCAAC
GGGGTGCCCG TACGCATGGC CGGGGCCCAT ACCGACATCA CCACCCGCAA GGAAGTGGAG
CAGGAACTGC GCGAGGCCAA GAACAACCTC GACAATATCC TGAACGCCAT GCCCTCGATC
ATCGTGGGGG TGGACCAGGC CGGCAGCATC ACCCTGTGGA ACCGCACGGC GGAACGCGTC
ACCAGCCTGT CGCGCGACGC CGTGCTTGGT CGCCCCGTGG GCGAGGCCCT GCCAGACTTC
GGCTTTCTGC TGGACGAAAT CCGCCGTTCC ATCGCCGAGG GCGGCACCAT TGCGCTGGAC
AAGACGCCCG TGCCCGGTCC CGGGGTCACC CGCTATTTCG ACATCGTCAT CTATCCCGTG
GTTTCGCGGG GCAGCTTTGG CGCCGTGGTG CGCCTGGACG ACATCACCGG ACGCATCCGC
ATCGAGGAGA TGATGGTGCA GACCGAAAAG ATGTTGTCGG TGGGCGGGCT TGCGGCAGGC
ATGGCGCACG AGATCAACAA CCCCCTCGGC GGCATCCTGC AGGGGGCGCA GAACATCCAG
CGCAGACTGG ACCCGGATTT CGCTCCCAAC GTGGTGGCGG CGGAAGAATC GGGCTGCTCC
ATGGATTCCA TCCGGGGCTA CCTGGACCGC CGGGGCATCC TGCGCTTTCT GGAGGGCATC
CGCGAATCGG GCAATCGCGC GGCCAACATC GTCTCCAACA TGCTGGAATT CAGCCGCCGC
AGCGAATCGC GCTGGCAGCG GGTGTCGCTG CCCTATCTGG TGGACCGCAC CCTGGAACTG
GCGGCCAACG ACTACGACCT GAAGAAGAAG TACGACTTCC GGCACATCGA CATCGTGCGC
GACTTTGCCG CAGACCTGCC CGACCTGCCC TGCATGCCCA CCGAAATCGA GCAGGTGTTG
CTGAACCTGT TCAAGAACGC CGCCCAGGCC ATGCACCTGC GCGGGGACAG GCCCGACCCG
CCGCGCATCT CGGTAAGCCT GCGCCACGAA GGCGGCATGC TGCGCATCGA CGTGGCCGAC
AACGGCCCCG GCATGGAAGA GGACGTGCGG CGCAGGGTGT TCGAGCCGTT CTTCACCACC
AAGAGCGTGG GCGAGGGGAC GGGCCTGGGG CTTTCGGTGT CGTACTTCAT CATCACCACC
AACCACGGCG GCACCTTTAC CGTGGAATCC GAGCCGGGCC GGGGCACCGT GTTCACCTTG
CGGTTGCCGG TGGATCAGCG CCACGTGACG ACGTAG
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| Protein sequence | MSNTTASKGI SVPDIIKGRS LSRDLTVSLV VMVLVVVAAL FSFVYVQISR DMLHEVDRKA
DEYITRLADI LSIPMWNFDA RTMDQIGSVF AQYELINEIH IEDAQGNTLF RVRKGADPDA
TVFRERAVRF ESEVIGRVSM VVTLQEYRRS LERLLKASAL IMGSVLVVLL ASTGVLLRVF
LRRPLEALRS GMDQIARGDF AYDMGSIAHA ELAQIAENFS RMCSQVEQRE NELHAINTKL
QDEIQSRRQT ELALRASEER YALVVGGTSD GIWDWDLTTN TVYFSPRWKS IIGYEDHEIP
NRPDEWKGRV HPDDLDAVLH AHDDYLARRV PEFQVEYRMR HKDDSYRWIL GRGAALWDVN
GVPVRMAGAH TDITTRKEVE QELREAKNNL DNILNAMPSI IVGVDQAGSI TLWNRTAERV
TSLSRDAVLG RPVGEALPDF GFLLDEIRRS IAEGGTIALD KTPVPGPGVT RYFDIVIYPV
VSRGSFGAVV RLDDITGRIR IEEMMVQTEK MLSVGGLAAG MAHEINNPLG GILQGAQNIQ
RRLDPDFAPN VVAAEESGCS MDSIRGYLDR RGILRFLEGI RESGNRAANI VSNMLEFSRR
SESRWQRVSL PYLVDRTLEL AANDYDLKKK YDFRHIDIVR DFAADLPDLP CMPTEIEQVL
LNLFKNAAQA MHLRGDRPDP PRISVSLRHE GGMLRIDVAD NGPGMEEDVR RRVFEPFFTT
KSVGEGTGLG LSVSYFIITT NHGGTFTVES EPGRGTVFTL RLPVDQRHVT T
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