Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2162 |
Symbol | |
ID | 7174084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 2695124 |
End bp | 2696593 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643540682 |
Product | RND efflux system, outer membrane lipoprotein, NodT family |
Protein accession | YP_002436573 |
Protein GI | 218887252 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCAA CGGCCATGCT GGCGGCCACG CTGGCCGGGT GCTCCTTCGG CCCCGACCAC GCCCGCCCCG CCATGGACCT GCCCGACGCC TGGCGCCCGG GCACGGCGGA CACGGGCACC GTGCAGGACG GCTGGTGGAA GGGCTTCGGC GATCCGGCAC TGGATGCCCT GGTGGCCTCG GCGCTGGACC ACAACCGCGA CCTGGCCAAG GCCATCGCCA ACGTGGACGA GGCCCGCGCC CAGCTGGGCC TTGCCCGGGC CAACCAGATG CCCCGGGTCG ACGCGCAGGG CGCATCGCAG CGCCAGCGCT ATTCGCTGGA GGGCTTCAAC TCGTTCGATG AATCCACCCG CGTGCAGGAC CTGCACAACG CGGGCGGCGT CCTGTCCTAC GAAATGGACC TGTGGGGCCG CTACCGCCGC GCCAGCGAGG CGGCGCGGGC CGACCTGCTG TCCACCATGG CCGCGCGCGA CACCGTGCGT CTGGCCCTGA CCGCGCAGGT GGCCCGCACC TACTTCGACC TGCGCGCCTA CGACCAGCAG TTGCAGGTGG CCCGCGACAC GCTGGCCTCG CGCGAATCCA CGCAGGAACT GCGCAAGGTG CGCTTCGAAC TGGGCCTGAC CAGTGAACTC GACTATCGCC AGGCCATCGC AGAAGCGGCT GCCGCCCGGT CCACCGTGCA CACCCTGCAA TACAACGTGT CCGCCAGCGA GGCGGCACTG GGCGTGCTTA CCGGCAAAAG CCCGCGCGAC ATCGTGACCG GCACCGTGGA GCGCGGCCTG GCCGTGGACG CCGTACCCGT GCCCCCCAGC GTGCCCGCCG GATTGCCTTC GGCCCTGCTG GAACGCCGCC CGGACATCGT CCAGGCCGAA CAGCAACTGG CGGCGGCCAG CGCCAATATC GGCGTGGCCA AGGCGGCGTA CTTCCCGTCC ATCTCGCTGA CCGGGCTGCT GGGGTATGAA AGCAGCGACC TCACCCGGCT GTTCACCGGC CCTGCGGGCA CCTGGCGGTA CGCGGGCAGC GTGTCCATGC CCATCTTCGA CTTTGGCCGG ATCAAGGCCG GGGTTGAAGC GGCAGAGGCA CGCCAGCGCG CCGCCCTGGC CGGGTACGAA AAGGCCGTGC AGGACGCCTT CCGCGAGGCG CAGGACGCCC TGGTGGCCAA CCGCAAGGCG CGCGGCGTGG TGGAAGCGCA GACTACCCAG GTCACCGCGC TGCGCCGTTC GCTGCATCTG GCCAAGTTGC GCTACGACAA CGGCTATTCC AGTTACCTCG AGGTGCTGGA CGCGGAACGC AGCCTGTTCG ACGTGGAGAT ATCCCTGGCC TCGGCCCAGC GTGACCAACT GGTGGCCGTG GTCGAGGTGT ACCGCGCCCT TGGCGGCGGC TGGGCGGGCA TTGCCCCGCT GGCCCCAAAT GCCGCAGACG CTCCCGAAGC CCCGGCTCAG GACGGCAAGC CGGTGGCGGC CGCGCAATGA
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Protein sequence | MLATAMLAAT LAGCSFGPDH ARPAMDLPDA WRPGTADTGT VQDGWWKGFG DPALDALVAS ALDHNRDLAK AIANVDEARA QLGLARANQM PRVDAQGASQ RQRYSLEGFN SFDESTRVQD LHNAGGVLSY EMDLWGRYRR ASEAARADLL STMAARDTVR LALTAQVART YFDLRAYDQQ LQVARDTLAS RESTQELRKV RFELGLTSEL DYRQAIAEAA AARSTVHTLQ YNVSASEAAL GVLTGKSPRD IVTGTVERGL AVDAVPVPPS VPAGLPSALL ERRPDIVQAE QQLAAASANI GVAKAAYFPS ISLTGLLGYE SSDLTRLFTG PAGTWRYAGS VSMPIFDFGR IKAGVEAAEA RQRAALAGYE KAVQDAFREA QDALVANRKA RGVVEAQTTQ VTALRRSLHL AKLRYDNGYS SYLEVLDAER SLFDVEISLA SAQRDQLVAV VEVYRALGGG WAGIAPLAPN AADAPEAPAQ DGKPVAAAQ
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