| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2153 |
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| Symbol | |
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| ID | 7174075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2682313 |
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| End bp | 2684127 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643540673 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002436564 |
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| Protein GI | 218887243 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAC GAATGGAATG CATCTTTCGA GACCGGGTGG GCATCGTGTC CGACCTTTCC
TCGCTGCTGG CCGGGCAGGC GCTGTCCATC GTCTCCATGG AAGTGGAGCG CCGCCCCGGC
GGTGCGGCGG CCACCCTCCC CACGTGCGCG ATTGCCGACC TGACCCCCGG CCCGGCTTCC
GCCCCCCCTC CGTCCCCTGC CCCCTCTCCG GTCCCTGGCC CGGCTCACGC TCCTGCGTTC
GGCATGGATC GCGCCTTCGT GTACCTGGAG GCGGACAGCT CGCGCGACGT GGACCGCGCC
GCCCTGTTCG AGACGCTGGG CCGCATCCCC GACCTGCTGG AATTCCGCAT CGTGGACACC
CTGCCCGCCG AGGAGCGCGC CAACCGTTTT CTGGTGCTGC TGGACAACCT GCGCGACGGG
GTGCTGTCCA TCGACGCCGA GGGGCGGGTG ACCTCCATCA ACAAGGTGGC CCGCGAGGCC
TACGGGTGTA CCGGGGCACC GGGCGTGTCC GGCACATCGG GCACGCCGGG CGGCACCCCC
GCCGCCGACC TGTCCGGCCT GCCGCTGGAC GCGCTGGGCC TGCCCGACCG GGGCATCCTG
GATTGCCTGT CCGGGCGCGA ACTGGTGGAC GCCAAGCGCG AGGTGGCCAC CCCGGGCGGC
GGGCGGCTGC AATTCTTCGT CACCCGCAGG CCCATCCGCG ACGGCGAAGG GCGCATCATC
GGCGCGGTGG AAGTGGCCCG CGACATGCGC GAAATCCGCA AGCTGGCCCG TTCCATCACC
GAGCCCGCGC AGGTGACCTT CGGCGACATC GTGGGCCAGC ACCCGGCCAT CGGCTTTGCC
ATTTCGTTTG CCCGGCGCGT GGCCGCCACC GATTCCATCA TCGCCATCCG GGGCGAAAGC
GGCACCGGCA AGGAACTGTT CGCACGGGCC ATCCACACCG CCAGCGGGCG GCAGGGGCCG
TTCGTGCCGG TGAACTGCGC GGCCCTGCCG GAACAGCTGC TGGAAAGCGA GCTGTTCGGC
TACGAGGCCG GAGCCTTTAC CGGCGGACGA CGCGATGGCA AGCCCGGCCT GTTCGAGACG
GCGCGCGGCG GCACGGTGCT GCTGGACGAG ATAGGCGACA TGCCGCTGGC CTCGCAGGCC
AAGATGCTGC GGGTGATGCA GGAGGGCAGC GTGCGCCGGG TGGGCGGCAC TGCGGAGGTG
CCCGTGGACG TGCGCATCAT CACCGCCACC AACCGCACCC TGGAGCGGCT GGTGGAGGAA
GGGCGCTTTC GGCAGGACCT GTACTACCGC ATCAACGTGC TGCCCATTCA CATTCCGCCG
CTGAAGGAAC GGCCCGGGGA CATCGCCGTG CTGGCCGAGC ACTTTCTGCT GGGGCTGGCC
GCCCGGCTGG GCGGGCCGGT GCGCAGCCTT TCGCCGGGGG CGCTGGCGCG CCTTGCGGGC
CACCACTGGC CGGGCAACGT GCGCGAACTG AAGAACGTGG TGGAGCGCGC CGCCATCCTG
TGCCCGGACG ATGTGGTGGG CGCGCGGTTC ATCCTGTTTG CCCATGAGCT GGAAGGCGGG
CTGTTCGGGG AGTCGGCCCG GCTGGCCGAC GGCGTGGCCG ATACCGTGGC CGATGCGGCG
GCGCTGGCCT CTGGCCACGA GCATCATGGG GATGGCGAGG GGCGGCTCAA GGACATGATT
GCCGTTTTTG AAAAACGGAT CATCGTCGAT GCCGTGGCCG CCGCAGGCAG TGTGCGCAAG
GCGGCAAGAA AGCTTGGAAT TTCCCATACC GCCCTGCTCG ACAAGCTGCG GCGGCATGGT
TTGAGAATGG TCTGA
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| Protein sequence | MKLRMECIFR DRVGIVSDLS SLLAGQALSI VSMEVERRPG GAAATLPTCA IADLTPGPAS
APPPSPAPSP VPGPAHAPAF GMDRAFVYLE ADSSRDVDRA ALFETLGRIP DLLEFRIVDT
LPAEERANRF LVLLDNLRDG VLSIDAEGRV TSINKVAREA YGCTGAPGVS GTSGTPGGTP
AADLSGLPLD ALGLPDRGIL DCLSGRELVD AKREVATPGG GRLQFFVTRR PIRDGEGRII
GAVEVARDMR EIRKLARSIT EPAQVTFGDI VGQHPAIGFA ISFARRVAAT DSIIAIRGES
GTGKELFARA IHTASGRQGP FVPVNCAALP EQLLESELFG YEAGAFTGGR RDGKPGLFET
ARGGTVLLDE IGDMPLASQA KMLRVMQEGS VRRVGGTAEV PVDVRIITAT NRTLERLVEE
GRFRQDLYYR INVLPIHIPP LKERPGDIAV LAEHFLLGLA ARLGGPVRSL SPGALARLAG
HHWPGNVREL KNVVERAAIL CPDDVVGARF ILFAHELEGG LFGESARLAD GVADTVADAA
ALASGHEHHG DGEGRLKDMI AVFEKRIIVD AVAAAGSVRK AARKLGISHT ALLDKLRRHG
LRMV
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