| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2141 |
|---|
| Symbol | |
|---|
| ID | 7174063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 2664868 |
|---|
| End bp | 2666997 |
|---|
| Gene Length | 2130 bp |
|---|
| Protein Length | 709 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643540661 |
|---|
| Product | peptidase U32 |
|---|
| Protein accession | YP_002436552 |
|---|
| Protein GI | 218887231 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 101 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACAACC GTGCCCCGGA ACGCGAGCAC CACCGCACCC GCCTGAGCGA TGCGGAACTG
GCGGAACTGC TGCCCCCCAG CGTGACCGCC GGGGCCGCCG CATCCGGCAG CGCCGCGCCT
GACCAGGCGG ACAACCTGCG CACGCCCGAA ATCCTTGCCC CGGCGGGCGA CATGCAGGCC
GCGCTGGCCG CATTCGCCGC TGGTGCCGAC GCCGTGTACC TGGGCCTGAA GCACTTTTCG
GCCCGCATGC AGGCGGAAAA CTTCTCCACC GGCGAACTGG CCGCGCTGAC GGACCTAGCC
CATTCCGAGG GCCGCCGCAT CTACGTGGCC ATGAACTCCA TGCTGAAACC GGGCGACACC
GGCGCAGCAG GCCGCCTGGT GGCCCGCCTG GCCCGTGACG TGCGGCCCGA CGCGCTCATC
GTGCAGGACC TCGGCATGCT GGACATCGCC CGGCAGGCCG GTTTCGCGGG TGAACTGCAT
CTTTCCACGC TGGCCAACGT CACCCACCCC GCCGCGCTCA CCGTGGCGCG CGACCTGGGC
GCCAGCCGGG TGATCCTGCC GCGCGAGCTG AACATCGACG AAATCCGCGC CTGCGGAAAC
GCCTGCCCGG ACGATCTGGA CCTTGAATTC TTCGTGCACG GGGCGCTGTG CTACTGCGTG
TCGGGCCGCT GCTACTGGTC CAGCTACATG GGCGGCAAAA GCGGCCTGCG GGGCCGCTGC
GTGCAGCCGT GCCGCCGGGT GTACCGCCAG AAGGGCCGCG AGGGGCGCTT CTTCTCCTGT
CTCGACCTTT CGCTGGACGT GCTGGCAAAG ACCCTGCTGT CGGTGCCGCA CATGGCCTCG
TGGAAGATCG AGGGCCGCAA GAAGGGGCCG CACTACGTGT ACTACGCGGT GTCGGCCTAC
CGCCTGCTGC GCGACAACCC GGACGACCCC AAGGCCCGCA AGCAGGCCGA GGACATCCTT
GAAATGGCCC TGGGCCGCCC CGGCACCCAT TCGCGCTTTC TGCCCCAGCG CGGCGACGAC
CCCACCGCCC CCGGCGAGCA GACCAGTTCC GGCCTGCTGG CGGGCAAGGT GGGGCAGACG
CCGGAAGGGG GCATCTTCTT CAAGCCGCGC TTCCAACTGC TGCCGCAGGA TCTTCTGCGC
ATCGGCTACG AGGACGAATC GTGGCACACC ACCCTGCCGG TGGCCCGCCA CATCCCCAAG
GCAGGCACCT TCAACCTGCG CCTGCCGCGC CACAAGACGC CCAAGCTGGG CACGCCGGTG
TTCCTCATCG ACCGTCGCGA GCCGGAACTG ACGCGCGAGG TGCGCACTTG GCAGGCCAAA
CTGGAACGCC ACCGCAAGGG CGGCGGCGAA GGCGGCGCGG TGGACTTCAC CCCCACCTAT
CCCGCCCCTG GCAAGTCCGC CCGCCCGCTG GACGTGATCC TGCGTGGCTC GCTGCCGCAT
GGCCGCGAGG GCAAGGCCGG GGTGCGCCCC GGCACGGTGA TGGGCCTGTG GCTGTCGCCC
AAGGCCCTGC GCGAGGTGTC GCGCACGCTG TACCCGCGCA TCTCGTGGTG GCTGCCGCCA
GTGATCTGGC CGGACGAAGA AGCCCAGTGG CTGCGCATGG CCCGCGAATC CGTCCGCGAC
GGCGCGCGCC ACTTCGTGCT GAACGCGCCG TGGCAGGTGG GCCTGTTCGG GGACGCGCAC
GCCCGGCGCG ACCTGGCGCT GACCGCCGGT CCCTTCTGCA ACACCTCCAA CCCGGCGGCG
CTGGCCGTAC TGCGCAAACT GGGCTTTGCC GCCGCCATCG TCAGCCCCGA ACTGCCCGGA
GAAGACATCC TGGCCCTGCC GCGCCAGAGC TACCTGCCGC TGGGCGTGGT GCTGTCCGGC
TACTGGCCCA TGGGCGTCAC CCGCCACCAC CTGGAGGGGC TGAAGCCGGG CGAGCCGTTC
AACAGCCCCA AGAACGAGGT GTTCTGGGCC CGGCGCTACG GCCAGAATAC CTGGATATAC
CCCGGCTGGC CGCTGGACAT CGAGGACCGC CGGGGCCAGC TGGAAGCCGC CGGGTACACC
CTGTTCGTGC GCATCGACGA GCACCCGCCC CTGACCGTGC CCGAGCCGCG CAGGACCAGT
CCGTTCAACT GGGACATTCC GCTGCTGTAA
|
|---|
| Protein sequence | MDNRAPEREH HRTRLSDAEL AELLPPSVTA GAAASGSAAP DQADNLRTPE ILAPAGDMQA
ALAAFAAGAD AVYLGLKHFS ARMQAENFST GELAALTDLA HSEGRRIYVA MNSMLKPGDT
GAAGRLVARL ARDVRPDALI VQDLGMLDIA RQAGFAGELH LSTLANVTHP AALTVARDLG
ASRVILPREL NIDEIRACGN ACPDDLDLEF FVHGALCYCV SGRCYWSSYM GGKSGLRGRC
VQPCRRVYRQ KGREGRFFSC LDLSLDVLAK TLLSVPHMAS WKIEGRKKGP HYVYYAVSAY
RLLRDNPDDP KARKQAEDIL EMALGRPGTH SRFLPQRGDD PTAPGEQTSS GLLAGKVGQT
PEGGIFFKPR FQLLPQDLLR IGYEDESWHT TLPVARHIPK AGTFNLRLPR HKTPKLGTPV
FLIDRREPEL TREVRTWQAK LERHRKGGGE GGAVDFTPTY PAPGKSARPL DVILRGSLPH
GREGKAGVRP GTVMGLWLSP KALREVSRTL YPRISWWLPP VIWPDEEAQW LRMARESVRD
GARHFVLNAP WQVGLFGDAH ARRDLALTAG PFCNTSNPAA LAVLRKLGFA AAIVSPELPG
EDILALPRQS YLPLGVVLSG YWPMGVTRHH LEGLKPGEPF NSPKNEVFWA RRYGQNTWIY
PGWPLDIEDR RGQLEAAGYT LFVRIDEHPP LTVPEPRRTS PFNWDIPLL
|
|---|
| |