Gene DvMF_2135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2135 
Symbol 
ID7174057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp2659395 
End bp2660492 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content69% 
IMG OID643540655 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_002436546 
Protein GI218887225 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones94 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGCC GTTTCCGCAC TTTCGGTCAG CCCTGTCCCC TCCGTCTTTC CCGCCTGCTG 
TCGTTCGCCG GGGCCTGCCG CCGTCGGGGG CGCGCCCTTG CCGCGTCCCT TGGACTGATG 
CTGGCCTGCC TGGCGGCCAT CCTGCCCGGA TGGCCCCGCA CCGCCAGCGC GGCCACGGAA 
CTGACCCTGG CCGTGGTGAC CACGCCCGGC TCGGCCCAGC ACGTCTGCGC CGAGCGGTTC 
CGGCAGTTGC TGGAGGAACG TTCGCACGGG GCGTACCGGG TGGTGGTGCA CCATTCCGGC 
ACTCTGGGCA CCGAGACGGA AATCCTGCAA CAGTTGCAAC TGGGCGGCGT GCAGTTGGCC 
ATCATCACCT TGGGCGTGCT TGATCCGTTC GTGCCCGAGG TGAAGGTGCT GGACTACCCC 
TTCCTGTTCC GCGACGCGGC AGAGGCCGAC CGCGTGCTGG ACGGGGCAAC GGGAAGGGCG 
CTGCTGGACG CGCTGGAGCG GGTGGGCCTG AAGGGGCTGC ACTTTTCCGA GAACGGCTTC 
CGCCATCTGA CCAACAACGT GCGCCCGGTG CGCAGCGTGG ACGACGTGCG CGGCCTGAAG 
ATCCGCGTGC TGGAATCGAC CCTGCACCGC GAGCTGTGGC GGGCCCTTGG CGCCAACCCC 
ACGCCCATGG GATGGCCCAT CTACGCGGAA TTGCAGCAGG GCACCATCGA CGGGCAGGAA 
AACCCCCTGT GGGTCATGGC GGAATACCGC ATGCCCGAGG TGCAGAAATA CCTTTCGCTG 
ACTGGGCACG TGTATTCCGC CCACGCTGAC CTGGCCAACC TGGCATGGTT CAACGGGCTG 
CCCCCGGCGG AACGCACGCT GGTCATGCAG TGCATGGCAG ACGCCGCCGC CTACCAGCGG 
GCCTACAACC GCCAGAAGGA CGCCGACTAC CTGCGCCGCC TGCGCGAGGC GGGCATGCAG 
GTGGTGGACG CGCCGGACCT GGCCTCGTTC CGCGCCCGCG CCGACGCGTT GCGCCAGAGC 
TCCCTGTTTT CCGACCCGCG CACCCGCGAC ATGCTGGCCC GCGTGCTGGC GGCGGTGGGG 
CGCCAGGGGG CGGAATGA
 
Protein sequence
MHRRFRTFGQ PCPLRLSRLL SFAGACRRRG RALAASLGLM LACLAAILPG WPRTASAATE 
LTLAVVTTPG SAQHVCAERF RQLLEERSHG AYRVVVHHSG TLGTETEILQ QLQLGGVQLA 
IITLGVLDPF VPEVKVLDYP FLFRDAAEAD RVLDGATGRA LLDALERVGL KGLHFSENGF 
RHLTNNVRPV RSVDDVRGLK IRVLESTLHR ELWRALGANP TPMGWPIYAE LQQGTIDGQE 
NPLWVMAEYR MPEVQKYLSL TGHVYSAHAD LANLAWFNGL PPAERTLVMQ CMADAAAYQR 
AYNRQKDADY LRRLREAGMQ VVDAPDLASF RARADALRQS SLFSDPRTRD MLARVLAAVG 
RQGAE