| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2079 |
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| Symbol | |
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| ID | 7173998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2583531 |
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| End bp | 2585348 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643540596 |
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| Product | NmrA family protein |
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| Protein accession | YP_002436490 |
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| Protein GI | 218887169 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 93 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAA GCACCGCGCC CCCGCAGGGT ACGTCCACTC CCGATTCTTT GACCGACACC
ACCCCGCCCC TCCCTGTCCC CCCAGCCGCC CCGGCCACGC CAGCCGCCCC GGGCCAATTC
CGGGTGCCGG AGCATGCCGA TGCCGCCCGT TCCGGCGCAG TGCCCGAACC CCACGTATCC
CCCAAACGCG GCACCGTGCT CATTACCGGG GCCACGGGCT ACGTGGGCGG CCGCCTGGCC
CCCCTGCTGC TGGAACGCGG CTGGAACGTC CGCGCGCTGG CGCGCAACCC GGCCAAGCTG
GCCGGGCGCC CGTGGGCGGC ACACCCCGGC TGCACCATCG TGCGCGGTGA CATTCTGGAC
GAGCCGTCCC TGCGCGAGGC TCTGCGGGGG TGCGACGCGG TGTTCTACCT GGTGCATTCC
ATGAACCCCG CCGTGGCCGC CTTTGCCGAT GCCGACCGCA AGGCCGCCTG CTGCATGGTG
CGCGCCCTGC AAGCCCTGCG CGGCACGCAG CACGCCCTGC CCAGGGTCAT CTACCTGAGC
GGGCTGCTGC CCCCGGAAAC AAACACGCAA GGGCACGGAG CCAGCCGTGT GTCCGAGCAC
CTGCGCTCGC GCGCCGAAGT GGGCGAGATA CTGGCCCTGG CCGACGCGCC GCTCACCGTG
CTGCGCGCGG CGCAGATCAT AGGCTCCGGC AGCGCCTCGT TCGAAATCAT CCGCTATCTG
GTGGACCGCC TGCCGGTCAT GATCACCCCG CGCTGGGTCC ACATGCAGTG CCAGCCCATC
GCCATCAGCA ACGTGCTGGA ATACCTGGCT GGCTGCCTGG ACCACCCCGA AACGGCAGGG
CAGGCCTACG ACATAGGCGG GCCGGACGTG CTGAGCTACC GGGAACTGTT CGACATCTAC
GCCCGCGAGG CGGGCCTGCG CCGACGGCTG ATCATCCCCG TGCCGCTGCT GACGCCGGAA
CTCTCCGCCC ACTGGCTGCA TCTGGTCACC CCGGTGCCGG TGGCGCTGGC GCGGCCACTC
ATCCACGGGC TGCGCCAGCG CGTGGTGTGC ACTGAAACGC GCATCCGCGA CATCATTCCG
CAGAATCTGC TGCCCTGCGC CGAGGCCATC CGCCTCGCAC TGGACCGGCT GCGCACGCAC
GCCGTGCCCA CCCGCTGGAC CGACGCGGGC GGCCCCGCCG TGCCGGAATG GGTGGCCTGC
GGCGACGCCG ACTACGCGGG CGGGCATTTG CTGGGCGATG GCTGGGGGGT ACGGCTGGCG
GCCACGCCGG AAGCCGTGTG GAAGCCCGTG GAACGCATCG GCGGCGATAC CGGCTGGTAT
CAGGACGACG CCCTGTGGCG GCTGCGCGGC CTGCTGGATA CCCTGGTCGG GGGGCCGGGG
CTGCGGCGCG GCAGGCGCGA TCCGGAAACC CTGCGCACGG GCGATGCCCT GGACTTCTGG
CGGGTGCTGG ACGTGCAGCC CGGCAAGCGC CTGCTGCTGC TGGCCGAAAT GAAGGTGCCG
GGCGACGCCC TGCTGGAATT CGTGGTGCGC CCGGTTACGG ATGCGGAACA CGGCGGCGAT
TCCGTGGCAA CGGCCACGGG TGCCACAGCC ACGGAATTGT GGATGCAGTC CTGGTTCCTG
CCGCGCGGCC TGGCCGGGCT GGCCTACTGG TATGCCCTGC TTCCGGTGCA CGGGCGCATC
TTTCGGGGCA TGCTGGCGGC CATCGCCACG GCCACGGGCG CACCGGTGCT GCGGCCCCCC
TTCCGCCTGC CCGCGCAGCG CAACCTTGCC TGCGCCCTGC CCGGGGTACC CGCCGCAGGT
TCCTCCTCGC CATCCTGA
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| Protein sequence | MPASTAPPQG TSTPDSLTDT TPPLPVPPAA PATPAAPGQF RVPEHADAAR SGAVPEPHVS
PKRGTVLITG ATGYVGGRLA PLLLERGWNV RALARNPAKL AGRPWAAHPG CTIVRGDILD
EPSLREALRG CDAVFYLVHS MNPAVAAFAD ADRKAACCMV RALQALRGTQ HALPRVIYLS
GLLPPETNTQ GHGASRVSEH LRSRAEVGEI LALADAPLTV LRAAQIIGSG SASFEIIRYL
VDRLPVMITP RWVHMQCQPI AISNVLEYLA GCLDHPETAG QAYDIGGPDV LSYRELFDIY
AREAGLRRRL IIPVPLLTPE LSAHWLHLVT PVPVALARPL IHGLRQRVVC TETRIRDIIP
QNLLPCAEAI RLALDRLRTH AVPTRWTDAG GPAVPEWVAC GDADYAGGHL LGDGWGVRLA
ATPEAVWKPV ERIGGDTGWY QDDALWRLRG LLDTLVGGPG LRRGRRDPET LRTGDALDFW
RVLDVQPGKR LLLLAEMKVP GDALLEFVVR PVTDAEHGGD SVATATGATA TELWMQSWFL
PRGLAGLAYW YALLPVHGRI FRGMLAAIAT ATGAPVLRPP FRLPAQRNLA CALPGVPAAG
SSSPS
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